Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM1O43325 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYRM1O43325 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LYRM1O43325 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
LYRM1O43325 AC141586.4-201ENST00000624558 1573 ntBASIC20.52■□□□□ 0.88
LYRM1O43325 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYRM1O43325 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYRM1O43325 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.52■□□□□ 0.88
LYRM1O43325 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYRM1O43325 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LYRM1O43325 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.51■□□□□ 0.87
LYRM1O43325 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYRM1O43325 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LYRM1O43325 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYRM1O43325 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LYRM1O43325 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LYRM1O43325 AP002365.1-201ENST00000603448 772 ntBASIC20.5■□□□□ 0.87
LYRM1O43325 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LYRM1O43325 AL117328.2-201ENST00000624617 1940 ntBASIC20.5■□□□□ 0.87
LYRM1O43325 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYRM1O43325 C9orf163-202ENST00000624034 2573 ntBASIC20.5■□□□□ 0.87
LYRM1O43325 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYRM1O43325 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.5■□□□□ 0.87
LYRM1O43325 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LYRM1O43325 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LYRM1O43325 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LYRM1O43325 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
LYRM1O43325 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
LYRM1O43325 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYRM1O43325 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYRM1O43325 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYRM1O43325 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LYRM1O43325 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYRM1O43325 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LYRM1O43325 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LYRM1O43325 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
LYRM1O43325 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LYRM1O43325 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LYRM1O43325 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LYRM1O43325 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.48■□□□□ 0.87
LYRM1O43325 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LYRM1O43325 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.47■□□□□ 0.87
LYRM1O43325 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LYRM1O43325 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYRM1O43325 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LYRM1O43325 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYRM1O43325 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LYRM1O43325 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYRM1O43325 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYRM1O43325 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYRM1O43325 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LYRM1O43325 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYRM1O43325 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LYRM1O43325 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYRM1O43325 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.45■□□□□ 0.86
LYRM1O43325 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYRM1O43325 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
LYRM1O43325 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYRM1O43325 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
LYRM1O43325 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
LYRM1O43325 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LYRM1O43325 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYRM1O43325 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYRM1O43325 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYRM1O43325 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
LYRM1O43325 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.43■□□□□ 0.86
LYRM1O43325 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LYRM1O43325 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LYRM1O43325 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LYRM1O43325 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LYRM1O43325 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LYRM1O43325 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.42■□□□□ 0.86
LYRM1O43325 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LYRM1O43325 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.42■□□□□ 0.86
LYRM1O43325 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
LYRM1O43325 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.42■□□□□ 0.86
LYRM1O43325 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYRM1O43325 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LYRM1O43325 LINC00273-201ENST00000539813 1452 ntBASIC20.42■□□□□ 0.86
LYRM1O43325 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LYRM1O43325 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYRM1O43325 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LYRM1O43325 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.41■□□□□ 0.86
LYRM1O43325 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LYRM1O43325 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYRM1O43325 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LYRM1O43325 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LYRM1O43325 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms