Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC097639.1-201ENST00000565519 1891 ntBASIC16.22■□□□□ 0.19
NDUFA1O15239 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 AP003733.4-201ENST00000623785 1697 ntBASIC16.22■□□□□ 0.19
NDUFA1O15239 AC079834.2-201ENST00000609776 1949 ntBASIC16.22■□□□□ 0.19
NDUFA1O15239 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NDUFA1O15239 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.22■□□□□ 0.19
NDUFA1O15239 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.22■□□□□ 0.19
NDUFA1O15239 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 LINC01971-201ENST00000617888 1048 ntBASIC16.22■□□□□ 0.19
NDUFA1O15239 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFA1O15239 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFA1O15239 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.21■□□□□ 0.19
NDUFA1O15239 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFA1O15239 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFA1O15239 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NDUFA1O15239 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDUFA1O15239 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.21■□□□□ 0.18
NDUFA1O15239 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
NDUFA1O15239 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
NDUFA1O15239 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFA1O15239 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NDUFA1O15239 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.2■□□□□ 0.18
NDUFA1O15239 AC096887.2-201ENST00000623443 1957 ntBASIC16.2■□□□□ 0.18
NDUFA1O15239 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.2■□□□□ 0.18
NDUFA1O15239 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NDUFA1O15239 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA1O15239 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA1O15239 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA1O15239 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NDUFA1O15239 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.19■□□□□ 0.18
NDUFA1O15239 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.19■□□□□ 0.18
NDUFA1O15239 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA1O15239 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NDUFA1O15239 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 AC008813.1-201ENST00000536597 885 ntBASIC16.18■□□□□ 0.18
NDUFA1O15239 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFA1O15239 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFA1O15239 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NDUFA1O15239 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.17■□□□□ 0.18
NDUFA1O15239 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFA1O15239 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.16■□□□□ 0.18
NDUFA1O15239 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFA1O15239 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFA1O15239 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFA1O15239 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFA1O15239 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L13-201ENST00000554103 1267 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L15-201ENST00000611059 1267 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L23-201ENST00000615195 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L24-201ENST00000617576 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L22-201ENST00000618238 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L20-201ENST00000619712 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L21-201ENST00000622058 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L10-201ENST00000622460 1267 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 DUX4L25-201ENST00000624915 1269 ntBASIC16.15■□□□□ 0.18
NDUFA1O15239 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NDUFA1O15239 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NDUFA1O15239 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDUFA1O15239 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NDUFA1O15239 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFA1O15239 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NDUFA1O15239 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFA1O15239 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFA1O15239 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFA1O15239 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms