Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.86■□□□□ 0.61
S4R3C0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
S4R3C0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
S4R3C0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.86■□□□□ 0.61
S4R3C0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
S4R3C0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
S4R3C0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.86■□□□□ 0.61
S4R3C0 AC025884.2-201ENST00000553429 711 ntBASIC18.86■□□□□ 0.61
S4R3C0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
S4R3C0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
S4R3C0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.85■□□□□ 0.61
S4R3C0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.85■□□□□ 0.61
S4R3C0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
S4R3C0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
S4R3C0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
S4R3C0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
S4R3C0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
S4R3C0 ECEL1P2-201ENST00000461596 1295 ntBASIC18.85■□□□□ 0.61
S4R3C0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
S4R3C0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
S4R3C0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
S4R3C0 AC096887.2-201ENST00000623443 1957 ntBASIC18.84■□□□□ 0.61
S4R3C0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
S4R3C0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
S4R3C0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.84■□□□□ 0.61
S4R3C0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
S4R3C0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
S4R3C0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
S4R3C0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
S4R3C0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
S4R3C0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.83■□□□□ 0.6
S4R3C0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
S4R3C0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
S4R3C0 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.82■□□□□ 0.6
S4R3C0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.82■□□□□ 0.6
S4R3C0 MIR3960-201ENST00000583311 91 ntBASIC18.82■□□□□ 0.6
S4R3C0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.82■□□□□ 0.6
S4R3C0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
S4R3C0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
S4R3C0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
S4R3C0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.82■□□□□ 0.6
S4R3C0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
S4R3C0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
S4R3C0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
S4R3C0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
S4R3C0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
S4R3C0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
S4R3C0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.81■□□□□ 0.6
S4R3C0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
S4R3C0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
S4R3C0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
S4R3C0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
S4R3C0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
S4R3C0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.79■□□□□ 0.6
S4R3C0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.79■□□□□ 0.6
S4R3C0 AC093536.1-201ENST00000569153 554 ntBASIC18.79■□□□□ 0.6
S4R3C0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
S4R3C0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.78■□□□□ 0.6
S4R3C0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
S4R3C0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.78■□□□□ 0.6
S4R3C0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
S4R3C0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
S4R3C0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
S4R3C0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.78■□□□□ 0.6
S4R3C0 RP9P-202ENST00000450133 1212 ntBASIC18.78■□□□□ 0.6
S4R3C0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
S4R3C0 AC135731.1-201ENST00000569415 2548 ntBASIC18.78■□□□□ 0.6
S4R3C0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
S4R3C0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
S4R3C0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.78■□□□□ 0.6
S4R3C0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S4R3C0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S4R3C0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S4R3C0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S4R3C0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S4R3C0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
S4R3C0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.77■□□□□ 0.6
S4R3C0 AC007029.1-201ENST00000604183 313 ntBASIC18.77■□□□□ 0.6
S4R3C0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
S4R3C0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
S4R3C0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
S4R3C0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
S4R3C0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.76■□□□□ 0.59
S4R3C0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.76■□□□□ 0.59
S4R3C0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.76■□□□□ 0.59
S4R3C0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.75■□□□□ 0.59
S4R3C0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.75■□□□□ 0.59
S4R3C0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.75■□□□□ 0.59
S4R3C0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
S4R3C0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
S4R3C0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.75■□□□□ 0.59
S4R3C0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.74■□□□□ 0.59
S4R3C0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
S4R3C0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
S4R3C0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.74■□□□□ 0.59
S4R3C0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
S4R3C0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
S4R3C0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
S4R3C0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
S4R3C0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms