Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.63■■□□□ 1.37
CSNK1G3Q9Y6M4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CSNK1G3Q9Y6M4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G3Q9Y6M4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G3Q9Y6M4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G3Q9Y6M4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G3Q9Y6M4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.62■■□□□ 1.37
CSNK1G3Q9Y6M4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G3Q9Y6M4 AC142472.1-201ENST00000612013 1741 ntBASIC23.62■■□□□ 1.37
CSNK1G3Q9Y6M4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSNK1G3Q9Y6M4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
CSNK1G3Q9Y6M4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSNK1G3Q9Y6M4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CSNK1G3Q9Y6M4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.6■■□□□ 1.37
CSNK1G3Q9Y6M4 BX255925.1-201ENST00000566954 1854 ntBASIC23.6■■□□□ 1.37
CSNK1G3Q9Y6M4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSNK1G3Q9Y6M4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CSNK1G3Q9Y6M4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.6■■□□□ 1.37
CSNK1G3Q9Y6M4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.6■■□□□ 1.37
CSNK1G3Q9Y6M4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSNK1G3Q9Y6M4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSNK1G3Q9Y6M4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CSNK1G3Q9Y6M4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.59■■□□□ 1.37
CSNK1G3Q9Y6M4 Z92544.1-202ENST00000571933 1220 ntBASIC23.59■■□□□ 1.37
CSNK1G3Q9Y6M4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.59■■□□□ 1.37
CSNK1G3Q9Y6M4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.59■■□□□ 1.37
CSNK1G3Q9Y6M4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSNK1G3Q9Y6M4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSNK1G3Q9Y6M4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CSNK1G3Q9Y6M4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CSNK1G3Q9Y6M4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CSNK1G3Q9Y6M4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.58■■□□□ 1.37
CSNK1G3Q9Y6M4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CSNK1G3Q9Y6M4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G3Q9Y6M4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CSNK1G3Q9Y6M4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CSNK1G3Q9Y6M4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.57■■□□□ 1.36
CSNK1G3Q9Y6M4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CSNK1G3Q9Y6M4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CSNK1G3Q9Y6M4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
CSNK1G3Q9Y6M4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
CSNK1G3Q9Y6M4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.55■■□□□ 1.36
CSNK1G3Q9Y6M4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSNK1G3Q9Y6M4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSNK1G3Q9Y6M4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.55■■□□□ 1.36
CSNK1G3Q9Y6M4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
CSNK1G3Q9Y6M4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CSNK1G3Q9Y6M4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSNK1G3Q9Y6M4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSNK1G3Q9Y6M4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CSNK1G3Q9Y6M4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
CSNK1G3Q9Y6M4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G3Q9Y6M4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G3Q9Y6M4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G3Q9Y6M4 AC239859.2-201ENST00000444165 318 ntBASIC23.53■■□□□ 1.36
CSNK1G3Q9Y6M4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G3Q9Y6M4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CSNK1G3Q9Y6M4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.52■■□□□ 1.36
CSNK1G3Q9Y6M4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.52■■□□□ 1.36
CSNK1G3Q9Y6M4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G3Q9Y6M4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G3Q9Y6M4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G3Q9Y6M4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.52■■□□□ 1.36
CSNK1G3Q9Y6M4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.52■■□□□ 1.36
CSNK1G3Q9Y6M4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G3Q9Y6M4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CSNK1G3Q9Y6M4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 KRT18P24-201ENST00000344739 1156 ntBASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 THA1P-201ENST00000590384 1145 ntBASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 AC131212.1-201ENST00000613771 668 ntBASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.51■■□□□ 1.35
CSNK1G3Q9Y6M4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSNK1G3Q9Y6M4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CSNK1G3Q9Y6M4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.49■■□□□ 1.35
CSNK1G3Q9Y6M4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CSNK1G3Q9Y6M4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CSNK1G3Q9Y6M4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.49■■□□□ 1.35
CSNK1G3Q9Y6M4 AL592295.1-201ENST00000400984 884 ntBASIC23.49■■□□□ 1.35
CSNK1G3Q9Y6M4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CSNK1G3Q9Y6M4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 AL356441.2-201ENST00000443009 864 ntBASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CSNK1G3Q9Y6M4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.47■■□□□ 1.35
CSNK1G3Q9Y6M4 AP004609.3-201ENST00000610705 1884 ntBASIC23.47■■□□□ 1.35
CSNK1G3Q9Y6M4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CSNK1G3Q9Y6M4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CSNK1G3Q9Y6M4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms