Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
TSSC4Q9Y5U2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSSC4Q9Y5U2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSSC4Q9Y5U2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSSC4Q9Y5U2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSSC4Q9Y5U2 AC142086.6-201ENST00000621154 1765 ntBASIC18.72■□□□□ 0.59
TSSC4Q9Y5U2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TSSC4Q9Y5U2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 LONRF2P2-201ENST00000439212 571 ntBASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TSSC4Q9Y5U2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 AC103724.3-201ENST00000564481 992 ntBASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 AP004609.3-201ENST00000610705 1884 ntBASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TSSC4Q9Y5U2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSSC4Q9Y5U2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.69■□□□□ 0.58
TSSC4Q9Y5U2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TSSC4Q9Y5U2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TSSC4Q9Y5U2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSSC4Q9Y5U2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TSSC4Q9Y5U2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.69■□□□□ 0.58
TSSC4Q9Y5U2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TSSC4Q9Y5U2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.69■□□□□ 0.58
TSSC4Q9Y5U2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TSSC4Q9Y5U2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSSC4Q9Y5U2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSSC4Q9Y5U2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.68■□□□□ 0.58
TSSC4Q9Y5U2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TSSC4Q9Y5U2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TSSC4Q9Y5U2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TSSC4Q9Y5U2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TSSC4Q9Y5U2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSSC4Q9Y5U2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TSSC4Q9Y5U2 AC022616.5-201ENST00000518796 181 ntBASIC18.67■□□□□ 0.58
TSSC4Q9Y5U2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.67■□□□□ 0.58
TSSC4Q9Y5U2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSSC4Q9Y5U2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSSC4Q9Y5U2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.65■□□□□ 0.58
TSSC4Q9Y5U2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TSSC4Q9Y5U2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.65■□□□□ 0.58
TSSC4Q9Y5U2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.65■□□□□ 0.58
TSSC4Q9Y5U2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.65■□□□□ 0.58
TSSC4Q9Y5U2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSSC4Q9Y5U2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TSSC4Q9Y5U2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSSC4Q9Y5U2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.64■□□□□ 0.57
TSSC4Q9Y5U2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TSSC4Q9Y5U2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TSSC4Q9Y5U2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TSSC4Q9Y5U2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSSC4Q9Y5U2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.64■□□□□ 0.57
TSSC4Q9Y5U2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.64■□□□□ 0.57
TSSC4Q9Y5U2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSSC4Q9Y5U2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSSC4Q9Y5U2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TSSC4Q9Y5U2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.63■□□□□ 0.57
TSSC4Q9Y5U2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.63■□□□□ 0.57
TSSC4Q9Y5U2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSSC4Q9Y5U2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSSC4Q9Y5U2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TSSC4Q9Y5U2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.63■□□□□ 0.57
TSSC4Q9Y5U2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TSSC4Q9Y5U2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSSC4Q9Y5U2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TSSC4Q9Y5U2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSSC4Q9Y5U2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.62■□□□□ 0.57
TSSC4Q9Y5U2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSSC4Q9Y5U2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TSSC4Q9Y5U2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TSSC4Q9Y5U2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TSSC4Q9Y5U2 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.61■□□□□ 0.57
TSSC4Q9Y5U2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.61■□□□□ 0.57
TSSC4Q9Y5U2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSSC4Q9Y5U2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms