Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MIR4281-201ENST00000580852 62 ntBASIC39.62■■■■□ 3.93
RIMBP3Q9UFD9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC39.62■■■■□ 3.93
RIMBP3Q9UFD9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC39.62■■■■□ 3.93
RIMBP3Q9UFD9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC39.62■■■■□ 3.93
RIMBP3Q9UFD9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC39.62■■■■□ 3.93
RIMBP3Q9UFD9 WHAMMP3-201ENST00000611636 1609 ntBASIC39.62■■■■□ 3.93
RIMBP3Q9UFD9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC39.62■■■■□ 3.93
RIMBP3Q9UFD9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
RIMBP3Q9UFD9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC39.6■■■■□ 3.93
RIMBP3Q9UFD9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC39.59■■■■□ 3.93
RIMBP3Q9UFD9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC39.59■■■■□ 3.93
RIMBP3Q9UFD9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
RIMBP3Q9UFD9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC39.58■■■■□ 3.93
RIMBP3Q9UFD9 AL136162.1-201ENST00000607711 1078 ntBASIC39.58■■■■□ 3.93
RIMBP3Q9UFD9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
RIMBP3Q9UFD9 EDA-201ENST00000338901 1233 ntBASIC39.58■■■■□ 3.93
RIMBP3Q9UFD9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
RIMBP3Q9UFD9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
RIMBP3Q9UFD9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
RIMBP3Q9UFD9 UNC93B3-201ENST00000308076 687 ntBASIC39.57■■■■□ 3.92
RIMBP3Q9UFD9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC39.57■■■■□ 3.92
RIMBP3Q9UFD9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC39.57■■■■□ 3.92
RIMBP3Q9UFD9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC39.56■■■■□ 3.92
RIMBP3Q9UFD9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
RIMBP3Q9UFD9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
RIMBP3Q9UFD9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
RIMBP3Q9UFD9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC39.54■■■■□ 3.92
RIMBP3Q9UFD9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC39.54■■■■□ 3.92
RIMBP3Q9UFD9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC39.54■■■■□ 3.92
RIMBP3Q9UFD9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
RIMBP3Q9UFD9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
RIMBP3Q9UFD9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
RIMBP3Q9UFD9 IKBKGP1-201ENST00000612193 1073 ntBASIC39.53■■■■□ 3.92
RIMBP3Q9UFD9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC39.53■■■■□ 3.92
RIMBP3Q9UFD9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
RIMBP3Q9UFD9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
RIMBP3Q9UFD9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC39.51■■■■□ 3.92
RIMBP3Q9UFD9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
RIMBP3Q9UFD9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC39.51■■■■□ 3.92
RIMBP3Q9UFD9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC39.51■■■■□ 3.92
RIMBP3Q9UFD9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC39.51■■■■□ 3.92
RIMBP3Q9UFD9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC39.51■■■■□ 3.92
RIMBP3Q9UFD9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
RIMBP3Q9UFD9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC39.5■■■■□ 3.91
RIMBP3Q9UFD9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC39.5■■■■□ 3.91
RIMBP3Q9UFD9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC39.49■■■■□ 3.91
RIMBP3Q9UFD9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
RIMBP3Q9UFD9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
RIMBP3Q9UFD9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC39.48■■■■□ 3.91
RIMBP3Q9UFD9 AL135925.1-201ENST00000605920 1701 ntBASIC39.48■■■■□ 3.91
RIMBP3Q9UFD9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 AL355001.2-201ENST00000620617 1191 ntBASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC39.47■■■■□ 3.91
RIMBP3Q9UFD9 ESRRAP2-201ENST00000418437 1549 ntBASIC39.46■■■■□ 3.91
RIMBP3Q9UFD9 AF213884.3-201ENST00000563833 479 ntBASIC39.46■■■■□ 3.91
RIMBP3Q9UFD9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC39.46■■■■□ 3.91
RIMBP3Q9UFD9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC39.45■■■■□ 3.91
RIMBP3Q9UFD9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC39.45■■■■□ 3.91
RIMBP3Q9UFD9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
RIMBP3Q9UFD9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC39.45■■■■□ 3.91
RIMBP3Q9UFD9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC39.44■■■■□ 3.9
RIMBP3Q9UFD9 AC024257.2-201ENST00000549699 147 ntBASIC39.44■■■■□ 3.9
RIMBP3Q9UFD9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC39.42■■■■□ 3.9
RIMBP3Q9UFD9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC39.42■■■■□ 3.9
RIMBP3Q9UFD9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC39.42■■■■□ 3.9
RIMBP3Q9UFD9 AL136967.2-201ENST00000623968 743 ntBASIC39.42■■■■□ 3.9
RIMBP3Q9UFD9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC39.42■■■■□ 3.9
RIMBP3Q9UFD9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
RIMBP3Q9UFD9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC39.41■■■■□ 3.9
RIMBP3Q9UFD9 MIR939-201ENST00000401314 82 ntBASIC39.4■■■■□ 3.9
RIMBP3Q9UFD9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC39.4■■■■□ 3.9
RIMBP3Q9UFD9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC39.39■■■■□ 3.9
RIMBP3Q9UFD9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC39.39■■■■□ 3.9
RIMBP3Q9UFD9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC39.39■■■■□ 3.9
RIMBP3Q9UFD9 ID1-201ENST00000376105 1233 ntBASIC39.39■■■■□ 3.9
RIMBP3Q9UFD9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC39.38■■■■□ 3.89
RIMBP3Q9UFD9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
RIMBP3Q9UFD9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
RIMBP3Q9UFD9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
RIMBP3Q9UFD9 AP001330.3-201ENST00000520123 633 ntBASIC39.38■■■■□ 3.89
RIMBP3Q9UFD9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
RIMBP3Q9UFD9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
RIMBP3Q9UFD9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
RIMBP3Q9UFD9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC39.37■■■■□ 3.89
RIMBP3Q9UFD9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
RIMBP3Q9UFD9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
RIMBP3Q9UFD9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
RIMBP3Q9UFD9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
RIMBP3Q9UFD9 CD72-202ENST00000378430 585 ntTSL 3 BASIC39.35■■■■□ 3.89
RIMBP3Q9UFD9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC39.35■■■■□ 3.89
RIMBP3Q9UFD9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
RIMBP3Q9UFD9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC39.33■■■■□ 3.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms