Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.42■■□□□ 1.66
TRIM11Q96F44 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM11Q96F44 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM11Q96F44 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM11Q96F44 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM11Q96F44 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM11Q96F44 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM11Q96F44 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM11Q96F44 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.4■■□□□ 1.66
TRIM11Q96F44 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TRIM11Q96F44 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.4■■□□□ 1.66
TRIM11Q96F44 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.39■■□□□ 1.66
TRIM11Q96F44 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM11Q96F44 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.39■■□□□ 1.66
TRIM11Q96F44 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.39■■□□□ 1.66
TRIM11Q96F44 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.39■■□□□ 1.66
TRIM11Q96F44 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TRIM11Q96F44 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM11Q96F44 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM11Q96F44 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM11Q96F44 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM11Q96F44 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM11Q96F44 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.39■■□□□ 1.66
TRIM11Q96F44 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM11Q96F44 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM11Q96F44 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM11Q96F44 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
TRIM11Q96F44 AC142381.3-201ENST00000568208 1670 ntBASIC25.38■■□□□ 1.65
TRIM11Q96F44 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM11Q96F44 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM11Q96F44 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM11Q96F44 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM11Q96F44 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.37■■□□□ 1.65
TRIM11Q96F44 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.37■■□□□ 1.65
TRIM11Q96F44 MIR4449-201ENST00000578365 66 ntBASIC25.37■■□□□ 1.65
TRIM11Q96F44 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
TRIM11Q96F44 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.37■■□□□ 1.65
TRIM11Q96F44 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM11Q96F44 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
TRIM11Q96F44 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM11Q96F44 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM11Q96F44 AC097639.1-201ENST00000565519 1891 ntBASIC25.36■■□□□ 1.65
TRIM11Q96F44 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM11Q96F44 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM11Q96F44 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.35■■□□□ 1.65
TRIM11Q96F44 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM11Q96F44 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM11Q96F44 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.34■■□□□ 1.65
TRIM11Q96F44 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM11Q96F44 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.33■■□□□ 1.65
TRIM11Q96F44 RP9P-202ENST00000450133 1212 ntBASIC25.33■■□□□ 1.65
TRIM11Q96F44 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
TRIM11Q96F44 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
TRIM11Q96F44 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM11Q96F44 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM11Q96F44 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM11Q96F44 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM11Q96F44 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM11Q96F44 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM11Q96F44 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.31■■□□□ 1.64
TRIM11Q96F44 AC135731.1-201ENST00000569415 2548 ntBASIC25.31■■□□□ 1.64
TRIM11Q96F44 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.31■■□□□ 1.64
TRIM11Q96F44 AC022211.4-201ENST00000625094 2161 ntBASIC25.31■■□□□ 1.64
TRIM11Q96F44 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM11Q96F44 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM11Q96F44 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM11Q96F44 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM11Q96F44 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM11Q96F44 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM11Q96F44 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM11Q96F44 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
TRIM11Q96F44 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM11Q96F44 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM11Q96F44 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TRIM11Q96F44 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM11Q96F44 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM11Q96F44 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.28■■□□□ 1.64
TRIM11Q96F44 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
TRIM11Q96F44 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM11Q96F44 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
TRIM11Q96F44 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM11Q96F44 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM11Q96F44 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM11Q96F44 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM11Q96F44 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
TRIM11Q96F44 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM11Q96F44 AC093536.1-201ENST00000569153 554 ntBASIC25.27■■□□□ 1.64
TRIM11Q96F44 AC007029.1-201ENST00000604183 313 ntBASIC25.27■■□□□ 1.64
TRIM11Q96F44 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM11Q96F44 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM11Q96F44 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.27■■□□□ 1.64
TRIM11Q96F44 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM11Q96F44 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.26■■□□□ 1.63
TRIM11Q96F44 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.26■■□□□ 1.63
TRIM11Q96F44 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.26■■□□□ 1.63
TRIM11Q96F44 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.26■■□□□ 1.63
TRIM11Q96F44 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM11Q96F44 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM11Q96F44 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM11Q96F44 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms