Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CKAP2Q8WWK9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
CKAP2Q8WWK9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CKAP2Q8WWK9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CKAP2Q8WWK9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.91■■□□□ 1.42
CKAP2Q8WWK9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CKAP2Q8WWK9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.9■■□□□ 1.42
CKAP2Q8WWK9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CKAP2Q8WWK9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CKAP2Q8WWK9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CKAP2Q8WWK9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CKAP2Q8WWK9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CKAP2Q8WWK9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CKAP2Q8WWK9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CKAP2Q8WWK9 LINC00543-201ENST00000567234 1845 ntBASIC23.89■■□□□ 1.41
CKAP2Q8WWK9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.88■■□□□ 1.41
CKAP2Q8WWK9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.88■■□□□ 1.41
CKAP2Q8WWK9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.88■■□□□ 1.41
CKAP2Q8WWK9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CKAP2Q8WWK9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.87■■□□□ 1.41
CKAP2Q8WWK9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.87■■□□□ 1.41
CKAP2Q8WWK9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CKAP2Q8WWK9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CKAP2Q8WWK9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CKAP2Q8WWK9 AC079834.2-201ENST00000609776 1949 ntBASIC23.86■■□□□ 1.41
CKAP2Q8WWK9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
CKAP2Q8WWK9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CKAP2Q8WWK9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CKAP2Q8WWK9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CKAP2Q8WWK9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CKAP2Q8WWK9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.85■■□□□ 1.41
CKAP2Q8WWK9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.85■■□□□ 1.41
CKAP2Q8WWK9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.85■■□□□ 1.41
CKAP2Q8WWK9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CKAP2Q8WWK9 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.85■■□□□ 1.41
CKAP2Q8WWK9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CKAP2Q8WWK9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.85■■□□□ 1.41
CKAP2Q8WWK9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CKAP2Q8WWK9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CKAP2Q8WWK9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CKAP2Q8WWK9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.84■■□□□ 1.41
CKAP2Q8WWK9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CKAP2Q8WWK9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CKAP2Q8WWK9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CKAP2Q8WWK9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CKAP2Q8WWK9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CKAP2Q8WWK9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CKAP2Q8WWK9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CKAP2Q8WWK9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.83■■□□□ 1.41
CKAP2Q8WWK9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
CKAP2Q8WWK9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CKAP2Q8WWK9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CKAP2Q8WWK9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CKAP2Q8WWK9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CKAP2Q8WWK9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CKAP2Q8WWK9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CKAP2Q8WWK9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CKAP2Q8WWK9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CKAP2Q8WWK9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CKAP2Q8WWK9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CKAP2Q8WWK9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.81■■□□□ 1.4
CKAP2Q8WWK9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CKAP2Q8WWK9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CKAP2Q8WWK9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CKAP2Q8WWK9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.81■■□□□ 1.4
CKAP2Q8WWK9 SUZ12P1-203ENST00000578195 985 ntBASIC23.81■■□□□ 1.4
CKAP2Q8WWK9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.81■■□□□ 1.4
CKAP2Q8WWK9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.81■■□□□ 1.4
CKAP2Q8WWK9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CKAP2Q8WWK9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.8■■□□□ 1.4
CKAP2Q8WWK9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CKAP2Q8WWK9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.79■■□□□ 1.4
CKAP2Q8WWK9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2Q8WWK9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2Q8WWK9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.79■■□□□ 1.4
CKAP2Q8WWK9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CKAP2Q8WWK9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CKAP2Q8WWK9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CKAP2Q8WWK9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CKAP2Q8WWK9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
CKAP2Q8WWK9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CKAP2Q8WWK9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CKAP2Q8WWK9 DUX4L28-201ENST00000623687 678 ntBASIC23.77■■□□□ 1.4
CKAP2Q8WWK9 AC141586.4-201ENST00000624558 1573 ntBASIC23.77■■□□□ 1.4
CKAP2Q8WWK9 DUSP8P5-201ENST00000422884 1815 ntBASIC23.77■■□□□ 1.4
CKAP2Q8WWK9 SLC6A10P-202ENST00000431994 2058 ntBASIC23.77■■□□□ 1.4
CKAP2Q8WWK9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2Q8WWK9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.76■■□□□ 1.39
CKAP2Q8WWK9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2Q8WWK9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CKAP2Q8WWK9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CKAP2Q8WWK9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2Q8WWK9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CKAP2Q8WWK9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2Q8WWK9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2Q8WWK9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2Q8WWK9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2Q8WWK9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CKAP2Q8WWK9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CKAP2Q8WWK9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms