Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.06■■■□□ 2.56
LINC00116Q8NCU8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.06■■■□□ 2.56
LINC00116Q8NCU8 AL449106.1-201ENST00000608517 1980 ntBASIC31.06■■■□□ 2.56
LINC00116Q8NCU8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LINC00116Q8NCU8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
LINC00116Q8NCU8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.05■■■□□ 2.56
LINC00116Q8NCU8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.05■■■□□ 2.56
LINC00116Q8NCU8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.05■■■□□ 2.56
LINC00116Q8NCU8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
LINC00116Q8NCU8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.04■■■□□ 2.56
LINC00116Q8NCU8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
LINC00116Q8NCU8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LINC00116Q8NCU8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.03■■■□□ 2.56
LINC00116Q8NCU8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LINC00116Q8NCU8 AC131281.2-201ENST00000520478 145 ntBASIC31.03■■■□□ 2.56
LINC00116Q8NCU8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
LINC00116Q8NCU8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
LINC00116Q8NCU8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
LINC00116Q8NCU8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LINC00116Q8NCU8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LINC00116Q8NCU8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
LINC00116Q8NCU8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LINC00116Q8NCU8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.02■■■□□ 2.56
LINC00116Q8NCU8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
LINC00116Q8NCU8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
LINC00116Q8NCU8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.56
LINC00116Q8NCU8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
LINC00116Q8NCU8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
LINC00116Q8NCU8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
LINC00116Q8NCU8 KRT18P10-201ENST00000388836 1287 ntBASIC31.01■■■□□ 2.55
LINC00116Q8NCU8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.01■■■□□ 2.55
LINC00116Q8NCU8 AL139246.5-201ENST00000606645 996 ntBASIC31.01■■■□□ 2.55
LINC00116Q8NCU8 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.01■■■□□ 2.55
LINC00116Q8NCU8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
LINC00116Q8NCU8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31■■■□□ 2.55
LINC00116Q8NCU8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31■■■□□ 2.55
LINC00116Q8NCU8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
LINC00116Q8NCU8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.99■■■□□ 2.55
LINC00116Q8NCU8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.99■■■□□ 2.55
LINC00116Q8NCU8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.99■■■□□ 2.55
LINC00116Q8NCU8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
LINC00116Q8NCU8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.98■■■□□ 2.55
LINC00116Q8NCU8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.98■■■□□ 2.55
LINC00116Q8NCU8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
LINC00116Q8NCU8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.98■■■□□ 2.55
LINC00116Q8NCU8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.97■■■□□ 2.55
LINC00116Q8NCU8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LINC00116Q8NCU8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.97■■■□□ 2.55
LINC00116Q8NCU8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.97■■■□□ 2.55
LINC00116Q8NCU8 AC092028.1-203ENST00000608262 953 ntBASIC30.97■■■□□ 2.55
LINC00116Q8NCU8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
LINC00116Q8NCU8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
LINC00116Q8NCU8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
LINC00116Q8NCU8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
LINC00116Q8NCU8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
LINC00116Q8NCU8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
LINC00116Q8NCU8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.95■■■□□ 2.55
LINC00116Q8NCU8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
LINC00116Q8NCU8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
LINC00116Q8NCU8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
LINC00116Q8NCU8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.94■■■□□ 2.54
LINC00116Q8NCU8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
LINC00116Q8NCU8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
LINC00116Q8NCU8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.94■■■□□ 2.54
LINC00116Q8NCU8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.93■■■□□ 2.54
LINC00116Q8NCU8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
LINC00116Q8NCU8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.93■■■□□ 2.54
LINC00116Q8NCU8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
LINC00116Q8NCU8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
LINC00116Q8NCU8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.93■■■□□ 2.54
LINC00116Q8NCU8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
LINC00116Q8NCU8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
LINC00116Q8NCU8 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.92■■■□□ 2.54
LINC00116Q8NCU8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
LINC00116Q8NCU8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.91■■■□□ 2.54
LINC00116Q8NCU8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
LINC00116Q8NCU8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
LINC00116Q8NCU8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
LINC00116Q8NCU8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.9■■■□□ 2.54
LINC00116Q8NCU8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
LINC00116Q8NCU8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
LINC00116Q8NCU8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
LINC00116Q8NCU8 AL136116.3-201ENST00000402907 1138 ntBASIC30.89■■■□□ 2.54
LINC00116Q8NCU8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.89■■■□□ 2.54
LINC00116Q8NCU8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
LINC00116Q8NCU8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
LINC00116Q8NCU8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
LINC00116Q8NCU8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
LINC00116Q8NCU8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
LINC00116Q8NCU8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
LINC00116Q8NCU8 MIR4281-201ENST00000580852 62 ntBASIC30.88■■■□□ 2.53
LINC00116Q8NCU8 AL117332.1-201ENST00000622628 974 ntBASIC30.88■■■□□ 2.53
LINC00116Q8NCU8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.88■■■□□ 2.53
LINC00116Q8NCU8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.88■■■□□ 2.53
LINC00116Q8NCU8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
LINC00116Q8NCU8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
LINC00116Q8NCU8 AC110285.6-201ENST00000617652 491 ntBASIC30.87■■■□□ 2.53
LINC00116Q8NCU8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
LINC00116Q8NCU8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
LINC00116Q8NCU8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms