Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.37■■■□□ 2.61
PROM2Q8N271 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PROM2Q8N271 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
PROM2Q8N271 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PROM2Q8N271 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PROM2Q8N271 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.35■■■□□ 2.61
PROM2Q8N271 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.35■■■□□ 2.61
PROM2Q8N271 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PROM2Q8N271 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
PROM2Q8N271 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.34■■■□□ 2.61
PROM2Q8N271 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.34■■■□□ 2.61
PROM2Q8N271 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.34■■■□□ 2.61
PROM2Q8N271 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.33■■■□□ 2.61
PROM2Q8N271 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.33■■■□□ 2.61
PROM2Q8N271 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.33■■■□□ 2.61
PROM2Q8N271 AC010997.5-201ENST00000609182 354 ntBASIC31.33■■■□□ 2.61
PROM2Q8N271 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.33■■■□□ 2.61
PROM2Q8N271 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.32■■■□□ 2.6
PROM2Q8N271 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.32■■■□□ 2.6
PROM2Q8N271 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.32■■■□□ 2.6
PROM2Q8N271 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
PROM2Q8N271 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PROM2Q8N271 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PROM2Q8N271 AL512631.2-201ENST00000604634 923 ntBASIC31.31■■■□□ 2.6
PROM2Q8N271 MIR6724-1-201ENST00000616420 92 ntBASIC31.31■■■□□ 2.6
PROM2Q8N271 MIR6724-2-201ENST00000616483 92 ntBASIC31.31■■■□□ 2.6
PROM2Q8N271 MIR6724-4-201ENST00000617390 92 ntBASIC31.31■■■□□ 2.6
PROM2Q8N271 MIR6724-3-201ENST00000622482 92 ntBASIC31.31■■■□□ 2.6
PROM2Q8N271 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
PROM2Q8N271 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PROM2Q8N271 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
PROM2Q8N271 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.3■■■□□ 2.6
PROM2Q8N271 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.29■■■□□ 2.6
PROM2Q8N271 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PROM2Q8N271 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PROM2Q8N271 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
PROM2Q8N271 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PROM2Q8N271 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PROM2Q8N271 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PROM2Q8N271 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PROM2Q8N271 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PROM2Q8N271 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
PROM2Q8N271 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PROM2Q8N271 AL139393.2-201ENST00000608721 2025 ntBASIC31.29■■■□□ 2.6
PROM2Q8N271 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PROM2Q8N271 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PROM2Q8N271 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.28■■■□□ 2.6
PROM2Q8N271 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.28■■■□□ 2.6
PROM2Q8N271 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PROM2Q8N271 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
PROM2Q8N271 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PROM2Q8N271 AC104564.3-201ENST00000582367 638 ntBASIC31.26■■■□□ 2.59
PROM2Q8N271 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.26■■■□□ 2.59
PROM2Q8N271 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PROM2Q8N271 AC135279.3-201ENST00000610945 1311 ntBASIC31.25■■■□□ 2.59
PROM2Q8N271 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PROM2Q8N271 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC31.25■■■□□ 2.59
PROM2Q8N271 AL356740.2-201ENST00000601559 647 ntBASIC31.25■■■□□ 2.59
PROM2Q8N271 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
PROM2Q8N271 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PROM2Q8N271 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
PROM2Q8N271 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
PROM2Q8N271 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PROM2Q8N271 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.24■■■□□ 2.59
PROM2Q8N271 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PROM2Q8N271 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
PROM2Q8N271 RASSF1-AS1-201ENST00000629828 790 ntBASIC31.23■■■□□ 2.59
PROM2Q8N271 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.23■■■□□ 2.59
PROM2Q8N271 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.23■■■□□ 2.59
PROM2Q8N271 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.23■■■□□ 2.59
PROM2Q8N271 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PROM2Q8N271 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
PROM2Q8N271 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PROM2Q8N271 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.22■■■□□ 2.59
PROM2Q8N271 AC106739.1-201ENST00000617035 715 ntBASIC31.22■■■□□ 2.59
PROM2Q8N271 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PROM2Q8N271 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC31.21■■■□□ 2.59
PROM2Q8N271 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PROM2Q8N271 KRT18P10-201ENST00000388836 1287 ntBASIC31.21■■■□□ 2.59
PROM2Q8N271 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC31.21■■■□□ 2.59
PROM2Q8N271 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.21■■■□□ 2.59
PROM2Q8N271 MIR4281-201ENST00000580852 62 ntBASIC31.21■■■□□ 2.59
PROM2Q8N271 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PROM2Q8N271 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
PROM2Q8N271 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PROM2Q8N271 AL031432.3-201ENST00000607698 485 ntBASIC31.2■■■□□ 2.59
PROM2Q8N271 SENP5-202ENST00000419026 973 ntTSL 3 BASIC31.19■■■□□ 2.58
PROM2Q8N271 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PROM2Q8N271 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
PROM2Q8N271 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.18■■■□□ 2.58
PROM2Q8N271 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.18■■■□□ 2.58
PROM2Q8N271 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.18■■■□□ 2.58
PROM2Q8N271 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
PROM2Q8N271 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.17■■■□□ 2.58
PROM2Q8N271 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC31.17■■■□□ 2.58
PROM2Q8N271 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.16■■■□□ 2.58
PROM2Q8N271 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PROM2Q8N271 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC31.16■■■□□ 2.58
PROM2Q8N271 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC31.16■■■□□ 2.58
PROM2Q8N271 PBX2P1-201ENST00000493219 1291 ntBASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms