Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC34.17■■■■□ 3.06
XRN1Q8IZH2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC34.17■■■■□ 3.06
XRN1Q8IZH2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
XRN1Q8IZH2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC34.16■■■■□ 3.06
XRN1Q8IZH2 AL139246.5-201ENST00000606645 996 ntBASIC34.16■■■■□ 3.06
XRN1Q8IZH2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
XRN1Q8IZH2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC34.16■■■■□ 3.06
XRN1Q8IZH2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC34.15■■■■□ 3.06
XRN1Q8IZH2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC34.15■■■■□ 3.06
XRN1Q8IZH2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
XRN1Q8IZH2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
XRN1Q8IZH2 TSPY9P-201ENST00000440215 945 ntBASIC34.15■■■■□ 3.06
XRN1Q8IZH2 TSPY11P-201ENST00000442607 1045 ntBASIC34.15■■■■□ 3.06
XRN1Q8IZH2 AC120024.1-201ENST00000562672 995 ntBASIC34.15■■■■□ 3.06
XRN1Q8IZH2 AL117332.1-201ENST00000622628 974 ntBASIC34.15■■■■□ 3.06
XRN1Q8IZH2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
XRN1Q8IZH2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
XRN1Q8IZH2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC34.14■■■■□ 3.06
XRN1Q8IZH2 AC110285.6-201ENST00000617652 491 ntBASIC34.14■■■■□ 3.06
XRN1Q8IZH2 RALB-208ENST00000631312 311 ntTSL 5 BASIC34.14■■■■□ 3.06
XRN1Q8IZH2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC34.13■■■■□ 3.05
XRN1Q8IZH2 KRT18P10-201ENST00000388836 1287 ntBASIC34.13■■■■□ 3.05
XRN1Q8IZH2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC34.13■■■■□ 3.05
XRN1Q8IZH2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC34.13■■■■□ 3.05
XRN1Q8IZH2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC34.13■■■■□ 3.05
XRN1Q8IZH2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
XRN1Q8IZH2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
XRN1Q8IZH2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
XRN1Q8IZH2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC34.11■■■■□ 3.05
XRN1Q8IZH2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC34.11■■■■□ 3.05
XRN1Q8IZH2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
XRN1Q8IZH2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
XRN1Q8IZH2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
XRN1Q8IZH2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.09■■■■□ 3.05
XRN1Q8IZH2 AL449106.1-201ENST00000608517 1980 ntBASIC34.09■■■■□ 3.05
XRN1Q8IZH2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC34.08■■■■□ 3.05
XRN1Q8IZH2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC34.08■■■■□ 3.05
XRN1Q8IZH2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC34.08■■■■□ 3.05
XRN1Q8IZH2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC34.08■■■■□ 3.05
XRN1Q8IZH2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC34.07■■■■□ 3.05
XRN1Q8IZH2 AC092028.1-203ENST00000608262 953 ntBASIC34.07■■■■□ 3.05
XRN1Q8IZH2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC34.07■■■■□ 3.04
XRN1Q8IZH2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC34.07■■■■□ 3.04
XRN1Q8IZH2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC34.07■■■■□ 3.04
XRN1Q8IZH2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC34.07■■■■□ 3.04
XRN1Q8IZH2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC34.06■■■■□ 3.04
XRN1Q8IZH2 SRR-208ENST00000576848 588 ntTSL 4 BASIC34.06■■■■□ 3.04
XRN1Q8IZH2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
XRN1Q8IZH2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC34.06■■■■□ 3.04
XRN1Q8IZH2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC34.06■■■■□ 3.04
XRN1Q8IZH2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
XRN1Q8IZH2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
XRN1Q8IZH2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC34.05■■■■□ 3.04
XRN1Q8IZH2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.05■■■■□ 3.04
XRN1Q8IZH2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC34.04■■■■□ 3.04
XRN1Q8IZH2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC34.04■■■■□ 3.04
XRN1Q8IZH2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.04■■■■□ 3.04
XRN1Q8IZH2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
XRN1Q8IZH2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC34.04■■■■□ 3.04
XRN1Q8IZH2 AL136116.3-201ENST00000402907 1138 ntBASIC34.04■■■■□ 3.04
XRN1Q8IZH2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC34.04■■■■□ 3.04
XRN1Q8IZH2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC34.03■■■■□ 3.04
XRN1Q8IZH2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
XRN1Q8IZH2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC34.01■■■■□ 3.04
XRN1Q8IZH2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC34.01■■■■□ 3.04
XRN1Q8IZH2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC34.01■■■■□ 3.04
XRN1Q8IZH2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
XRN1Q8IZH2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC34.01■■■■□ 3.04
XRN1Q8IZH2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
XRN1Q8IZH2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC34.01■■■■□ 3.03
XRN1Q8IZH2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC34■■■■□ 3.03
XRN1Q8IZH2 AL512631.2-201ENST00000604634 923 ntBASIC34■■■■□ 3.03
XRN1Q8IZH2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC34■■■■□ 3.03
XRN1Q8IZH2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC33.99■■■■□ 3.03
XRN1Q8IZH2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC33.99■■■■□ 3.03
XRN1Q8IZH2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
XRN1Q8IZH2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC33.99■■■■□ 3.03
XRN1Q8IZH2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC33.98■■■■□ 3.03
XRN1Q8IZH2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
XRN1Q8IZH2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC33.98■■■■□ 3.03
XRN1Q8IZH2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC33.97■■■■□ 3.03
XRN1Q8IZH2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC33.97■■■■□ 3.03
XRN1Q8IZH2 MIR4466-201ENST00000606121 54 ntBASIC33.97■■■■□ 3.03
XRN1Q8IZH2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC33.97■■■■□ 3.03
XRN1Q8IZH2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC33.97■■■■□ 3.03
XRN1Q8IZH2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC33.97■■■■□ 3.03
XRN1Q8IZH2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
XRN1Q8IZH2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
XRN1Q8IZH2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
XRN1Q8IZH2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
XRN1Q8IZH2 MIR3621-201ENST00000580529 85 ntBASIC33.96■■■■□ 3.03
XRN1Q8IZH2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC33.96■■■■□ 3.03
XRN1Q8IZH2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC33.96■■■■□ 3.03
XRN1Q8IZH2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC33.96■■■■□ 3.03
XRN1Q8IZH2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC33.95■■■■□ 3.02
XRN1Q8IZH2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC33.95■■■■□ 3.02
XRN1Q8IZH2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC33.95■■■■□ 3.02
XRN1Q8IZH2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
XRN1Q8IZH2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC33.94■■■■□ 3.02
XRN1Q8IZH2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC33.94■■■■□ 3.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms