Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 AL139125.2-201ENST00000623134 1869 ntBASIC18.88■□□□□ 0.61
FAM78BQ5VT40 AC012676.1-201ENST00000574705 1949 ntBASIC18.88■□□□□ 0.61
FAM78BQ5VT40 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM78BQ5VT40 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FAM78BQ5VT40 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
FAM78BQ5VT40 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FAM78BQ5VT40 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FAM78BQ5VT40 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
FAM78BQ5VT40 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.87■□□□□ 0.61
FAM78BQ5VT40 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
FAM78BQ5VT40 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
FAM78BQ5VT40 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM78BQ5VT40 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FAM78BQ5VT40 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FAM78BQ5VT40 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.85■□□□□ 0.61
FAM78BQ5VT40 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FAM78BQ5VT40 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FAM78BQ5VT40 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
FAM78BQ5VT40 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.84■□□□□ 0.61
FAM78BQ5VT40 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
FAM78BQ5VT40 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FAM78BQ5VT40 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.83■□□□□ 0.6
FAM78BQ5VT40 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.83■□□□□ 0.6
FAM78BQ5VT40 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FAM78BQ5VT40 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
FAM78BQ5VT40 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM78BQ5VT40 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM78BQ5VT40 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM78BQ5VT40 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.82■□□□□ 0.6
FAM78BQ5VT40 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.82■□□□□ 0.6
FAM78BQ5VT40 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.82■□□□□ 0.6
FAM78BQ5VT40 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
FAM78BQ5VT40 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FAM78BQ5VT40 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM78BQ5VT40 AC096887.2-201ENST00000623443 1957 ntBASIC18.79■□□□□ 0.6
FAM78BQ5VT40 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM78BQ5VT40 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM78BQ5VT40 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM78BQ5VT40 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM78BQ5VT40 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM78BQ5VT40 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM78BQ5VT40 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM78BQ5VT40 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM78BQ5VT40 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.78■□□□□ 0.6
FAM78BQ5VT40 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM78BQ5VT40 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms