Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 KRT18P60-201ENST00000312876 1297 ntBASIC23.44■■□□□ 1.34
CCSMST1Q4G0I0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.44■■□□□ 1.34
CCSMST1Q4G0I0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.44■■□□□ 1.34
CCSMST1Q4G0I0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
CCSMST1Q4G0I0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCSMST1Q4G0I0 SPCS2P3-201ENST00000500401 656 ntBASIC23.43■■□□□ 1.34
CCSMST1Q4G0I0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
CCSMST1Q4G0I0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCSMST1Q4G0I0 NTF6A-201ENST00000591175 560 ntBASIC23.43■■□□□ 1.34
CCSMST1Q4G0I0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.42■■□□□ 1.34
CCSMST1Q4G0I0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCSMST1Q4G0I0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.41■■□□□ 1.34
CCSMST1Q4G0I0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCSMST1Q4G0I0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.41■■□□□ 1.34
CCSMST1Q4G0I0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
CCSMST1Q4G0I0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCSMST1Q4G0I0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCSMST1Q4G0I0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCSMST1Q4G0I0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCSMST1Q4G0I0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCSMST1Q4G0I0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCSMST1Q4G0I0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCSMST1Q4G0I0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.4■■□□□ 1.34
CCSMST1Q4G0I0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.39■■□□□ 1.34
CCSMST1Q4G0I0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCSMST1Q4G0I0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.39■■□□□ 1.33
CCSMST1Q4G0I0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCSMST1Q4G0I0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.39■■□□□ 1.33
CCSMST1Q4G0I0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CCSMST1Q4G0I0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCSMST1Q4G0I0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CCSMST1Q4G0I0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
CCSMST1Q4G0I0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCSMST1Q4G0I0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CCSMST1Q4G0I0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 AC129492.7-201ENST00000622992 756 ntBASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCSMST1Q4G0I0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCSMST1Q4G0I0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CCSMST1Q4G0I0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
CCSMST1Q4G0I0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCSMST1Q4G0I0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CCSMST1Q4G0I0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCSMST1Q4G0I0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCSMST1Q4G0I0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCSMST1Q4G0I0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCSMST1Q4G0I0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCSMST1Q4G0I0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CCSMST1Q4G0I0 DUX4L9-201ENST00000449051 1259 ntBASIC23.35■■□□□ 1.33
CCSMST1Q4G0I0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCSMST1Q4G0I0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.35■■□□□ 1.33
CCSMST1Q4G0I0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CCSMST1Q4G0I0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.34■■□□□ 1.33
CCSMST1Q4G0I0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCSMST1Q4G0I0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCSMST1Q4G0I0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
CCSMST1Q4G0I0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCSMST1Q4G0I0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCSMST1Q4G0I0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCSMST1Q4G0I0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCSMST1Q4G0I0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCSMST1Q4G0I0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
CCSMST1Q4G0I0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCSMST1Q4G0I0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCSMST1Q4G0I0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCSMST1Q4G0I0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.32■■□□□ 1.32
CCSMST1Q4G0I0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCSMST1Q4G0I0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCSMST1Q4G0I0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCSMST1Q4G0I0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCSMST1Q4G0I0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCSMST1Q4G0I0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.31■■□□□ 1.32
CCSMST1Q4G0I0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCSMST1Q4G0I0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CCSMST1Q4G0I0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCSMST1Q4G0I0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.3■■□□□ 1.32
CCSMST1Q4G0I0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCSMST1Q4G0I0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CCSMST1Q4G0I0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CCSMST1Q4G0I0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.29■■□□□ 1.32
CCSMST1Q4G0I0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CCSMST1Q4G0I0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCSMST1Q4G0I0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.29■■□□□ 1.32
CCSMST1Q4G0I0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.29■■□□□ 1.32
CCSMST1Q4G0I0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCSMST1Q4G0I0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCSMST1Q4G0I0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCSMST1Q4G0I0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCSMST1Q4G0I0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCSMST1Q4G0I0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCSMST1Q4G0I0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CCSMST1Q4G0I0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCSMST1Q4G0I0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms