Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
TPM3P06753 AC079834.2-201ENST00000609776 1949 ntBASIC26.78■■□□□ 1.88
TPM3P06753 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TPM3P06753 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.77■■□□□ 1.88
TPM3P06753 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.77■■□□□ 1.88
TPM3P06753 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TPM3P06753 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC26.76■■□□□ 1.88
TPM3P06753 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TPM3P06753 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TPM3P06753 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TPM3P06753 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
TPM3P06753 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
TPM3P06753 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TPM3P06753 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.75■■□□□ 1.87
TPM3P06753 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TPM3P06753 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.75■■□□□ 1.87
TPM3P06753 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TPM3P06753 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TPM3P06753 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.75■■□□□ 1.87
TPM3P06753 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.74■■□□□ 1.87
TPM3P06753 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.74■■□□□ 1.87
TPM3P06753 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.74■■□□□ 1.87
TPM3P06753 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TPM3P06753 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TPM3P06753 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TPM3P06753 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TPM3P06753 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TPM3P06753 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TPM3P06753 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.73■■□□□ 1.87
TPM3P06753 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TPM3P06753 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TPM3P06753 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TPM3P06753 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TPM3P06753 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
TPM3P06753 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.72■■□□□ 1.87
TPM3P06753 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.72■■□□□ 1.87
TPM3P06753 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.71■■□□□ 1.87
TPM3P06753 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.71■■□□□ 1.87
TPM3P06753 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.71■■□□□ 1.87
TPM3P06753 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
TPM3P06753 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC26.71■■□□□ 1.87
TPM3P06753 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TPM3P06753 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TPM3P06753 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
TPM3P06753 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TPM3P06753 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.87
TPM3P06753 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TPM3P06753 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
TPM3P06753 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.7■■□□□ 1.86
TPM3P06753 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
TPM3P06753 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
TPM3P06753 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TPM3P06753 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TPM3P06753 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TPM3P06753 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.69■■□□□ 1.86
TPM3P06753 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TPM3P06753 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TPM3P06753 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
TPM3P06753 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TPM3P06753 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.68■■□□□ 1.86
TPM3P06753 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TPM3P06753 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
TPM3P06753 AC097639.1-201ENST00000565519 1891 ntBASIC26.68■■□□□ 1.86
TPM3P06753 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC26.68■■□□□ 1.86
TPM3P06753 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.67■■□□□ 1.86
TPM3P06753 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC26.67■■□□□ 1.86
TPM3P06753 LINC01124-201ENST00000409786 2117 ntBASIC26.67■■□□□ 1.86
TPM3P06753 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.67■■□□□ 1.86
TPM3P06753 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TPM3P06753 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
TPM3P06753 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TPM3P06753 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TPM3P06753 AC021231.2-201ENST00000594613 730 ntBASIC26.66■■□□□ 1.86
TPM3P06753 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TPM3P06753 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
TPM3P06753 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
TPM3P06753 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.66■■□□□ 1.86
TPM3P06753 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
TPM3P06753 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TPM3P06753 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
TPM3P06753 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
TPM3P06753 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TPM3P06753 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TPM3P06753 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.65■■□□□ 1.86
TPM3P06753 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TPM3P06753 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TPM3P06753 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.65■■□□□ 1.86
TPM3P06753 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TPM3P06753 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.64■■□□□ 1.86
TPM3P06753 AP003733.4-201ENST00000623785 1697 ntBASIC26.64■■□□□ 1.86
TPM3P06753 DUX4L29-201ENST00000425409 679 ntBASIC26.64■■□□□ 1.86
TPM3P06753 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
TPM3P06753 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.85
TPM3P06753 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
TPM3P06753 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
TPM3P06753 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.64■■□□□ 1.85
TPM3P06753 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
TPM3P06753 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.63■■□□□ 1.85
TPM3P06753 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
TPM3P06753 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms