Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
P04436 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.01■■□□□ 1.11
P04436 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
P04436 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
P04436 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.01■■□□□ 1.11
P04436 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
P04436 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22■■□□□ 1.11
P04436 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22■■□□□ 1.11
P04436 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22■■□□□ 1.11
P04436 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
P04436 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22■■□□□ 1.11
P04436 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
P04436 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
P04436 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
P04436 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
P04436 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
P04436 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
P04436 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.99■■□□□ 1.11
P04436 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
P04436 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.99■■□□□ 1.11
P04436 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.99■■□□□ 1.11
P04436 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
P04436 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
P04436 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
P04436 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
P04436 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
P04436 KRT8P33-201ENST00000508125 1423 ntBASIC21.98■■□□□ 1.11
P04436 YBX1P4-201ENST00000392794 808 ntBASIC21.98■■□□□ 1.11
P04436 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
P04436 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.97■■□□□ 1.11
P04436 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
P04436 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.97■■□□□ 1.11
P04436 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
P04436 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.96■■□□□ 1.11
P04436 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.96■■□□□ 1.11
P04436 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
P04436 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
P04436 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.96■■□□□ 1.11
P04436 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.96■■□□□ 1.11
P04436 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
P04436 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
P04436 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.96■■□□□ 1.11
P04436 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
P04436 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
P04436 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
P04436 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
P04436 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
P04436 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
P04436 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
P04436 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
P04436 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
P04436 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.95■■□□□ 1.1
P04436 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
P04436 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.94■■□□□ 1.1
P04436 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
P04436 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.94■■□□□ 1.1
P04436 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.94■■□□□ 1.1
P04436 AC019171.1-201ENST00000601251 1056 ntBASIC21.94■■□□□ 1.1
P04436 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
P04436 PVT1_1.1-201ENST00000615125 194 ntBASIC21.94■■□□□ 1.1
P04436 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.94■■□□□ 1.1
P04436 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
P04436 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
P04436 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
P04436 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.94■■□□□ 1.1
P04436 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
P04436 AL121749.1-202ENST00000609313 2153 ntBASIC21.94■■□□□ 1.1
P04436 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
P04436 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.93■■□□□ 1.1
P04436 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.93■■□□□ 1.1
P04436 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04436 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04436 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04436 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
P04436 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04436 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04436 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
P04436 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
P04436 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
P04436 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
P04436 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
P04436 LONRF2P2-201ENST00000439212 571 ntBASIC21.91■■□□□ 1.1
P04436 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.91■■□□□ 1.1
P04436 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
P04436 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
P04436 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
P04436 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.9■■□□□ 1.1
P04436 MIR4508-201ENST00000584178 70 ntBASIC21.9■■□□□ 1.1
P04436 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.89■■□□□ 1.1
P04436 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.89■■□□□ 1.09
P04436 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.89■■□□□ 1.09
P04436 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
P04436 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
P04436 AC103834.1-201ENST00000520383 144 ntBASIC21.88■■□□□ 1.09
P04436 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
P04436 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
P04436 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.87■■□□□ 1.09
P04436 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.87■■□□□ 1.09
P04436 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.87■■□□□ 1.09
P04436 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms