Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CD4P01730 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.87■■□□□ 1.89
CD4P01730 BX664725.1-201ENST00000438252 379 ntBASIC26.87■■□□□ 1.89
CD4P01730 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.87■■□□□ 1.89
CD4P01730 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.87■■□□□ 1.89
CD4P01730 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CD4P01730 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CD4P01730 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.86■■□□□ 1.89
CD4P01730 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CD4P01730 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CD4P01730 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CD4P01730 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CD4P01730 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.84■■□□□ 1.89
CD4P01730 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
CD4P01730 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CD4P01730 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CD4P01730 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.84■■□□□ 1.89
CD4P01730 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
CD4P01730 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CD4P01730 KRT18P24-201ENST00000344739 1156 ntBASIC26.83■■□□□ 1.89
CD4P01730 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.83■■□□□ 1.89
CD4P01730 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CD4P01730 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CD4P01730 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CD4P01730 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CD4P01730 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.82■■□□□ 1.88
CD4P01730 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
CD4P01730 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CD4P01730 KRT18P10-201ENST00000388836 1287 ntBASIC26.81■■□□□ 1.88
CD4P01730 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.81■■□□□ 1.88
CD4P01730 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CD4P01730 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
CD4P01730 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CD4P01730 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.81■■□□□ 1.88
CD4P01730 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CD4P01730 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.8■■□□□ 1.88
CD4P01730 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
CD4P01730 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
CD4P01730 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CD4P01730 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.79■■□□□ 1.88
CD4P01730 KRT16P3-201ENST00000439127 1283 ntBASIC26.79■■□□□ 1.88
CD4P01730 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.79■■□□□ 1.88
CD4P01730 LINC01003-201ENST00000564834 1764 ntBASIC26.79■■□□□ 1.88
CD4P01730 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CD4P01730 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CD4P01730 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.78■■□□□ 1.88
CD4P01730 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CD4P01730 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.78■■□□□ 1.88
CD4P01730 AC137630.3-201ENST00000607245 391 ntBASIC26.78■■□□□ 1.88
CD4P01730 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CD4P01730 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CD4P01730 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CD4P01730 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CD4P01730 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CD4P01730 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CD4P01730 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.77■■□□□ 1.88
CD4P01730 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
CD4P01730 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CD4P01730 AC142086.6-201ENST00000621154 1765 ntBASIC26.76■■□□□ 1.87
CD4P01730 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.76■■□□□ 1.87
CD4P01730 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.75■■□□□ 1.87
CD4P01730 MIR638-201ENST00000385237 100 ntBASIC26.75■■□□□ 1.87
CD4P01730 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CD4P01730 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.75■■□□□ 1.87
CD4P01730 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.74■■□□□ 1.87
CD4P01730 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CD4P01730 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CD4P01730 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
CD4P01730 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.74■■□□□ 1.87
CD4P01730 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.74■■□□□ 1.87
CD4P01730 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.74■■□□□ 1.87
CD4P01730 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.74■■□□□ 1.87
CD4P01730 AC021242.3-201ENST00000607598 1377 ntBASIC26.73■■□□□ 1.87
CD4P01730 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CD4P01730 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CD4P01730 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CD4P01730 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CD4P01730 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.72■■□□□ 1.87
CD4P01730 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
CD4P01730 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CD4P01730 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
CD4P01730 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CD4P01730 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CD4P01730 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.71■■□□□ 1.87
CD4P01730 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CD4P01730 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.71■■□□□ 1.87
CD4P01730 BX255925.1-201ENST00000566954 1854 ntBASIC26.7■■□□□ 1.87
CD4P01730 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CD4P01730 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CD4P01730 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CD4P01730 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CD4P01730 AC120024.1-201ENST00000562672 995 ntBASIC26.69■■□□□ 1.86
CD4P01730 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CD4P01730 AL449106.1-201ENST00000608517 1980 ntBASIC26.68■■□□□ 1.86
CD4P01730 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CD4P01730 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.68■■□□□ 1.86
CD4P01730 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.68■■□□□ 1.86
CD4P01730 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.68■■□□□ 1.86
CD4P01730 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
CD4P01730 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms