Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MT-CO1P00395 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
MT-CO1P00395 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MT-CO1P00395 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
MT-CO1P00395 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MT-CO1P00395 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MT-CO1P00395 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MT-CO1P00395 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MT-CO1P00395 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
MT-CO1P00395 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
MT-CO1P00395 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MT-CO1P00395 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MT-CO1P00395 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MT-CO1P00395 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
MT-CO1P00395 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MT-CO1P00395 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MT-CO1P00395 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.6■■□□□ 1.53
MT-CO1P00395 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.6■■□□□ 1.53
MT-CO1P00395 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.6■■□□□ 1.53
MT-CO1P00395 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MT-CO1P00395 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
MT-CO1P00395 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
MT-CO1P00395 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
MT-CO1P00395 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.59■■□□□ 1.53
MT-CO1P00395 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.59■■□□□ 1.53
MT-CO1P00395 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.59■■□□□ 1.53
MT-CO1P00395 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MT-CO1P00395 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
MT-CO1P00395 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MT-CO1P00395 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
MT-CO1P00395 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
MT-CO1P00395 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
MT-CO1P00395 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
MT-CO1P00395 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MT-CO1P00395 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.57■■□□□ 1.52
MT-CO1P00395 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
MT-CO1P00395 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MT-CO1P00395 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.56■■□□□ 1.52
MT-CO1P00395 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
MT-CO1P00395 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MT-CO1P00395 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MT-CO1P00395 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MT-CO1P00395 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MT-CO1P00395 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.55■■□□□ 1.52
MT-CO1P00395 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.55■■□□□ 1.52
MT-CO1P00395 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.55■■□□□ 1.52
MT-CO1P00395 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
MT-CO1P00395 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.54■■□□□ 1.52
MT-CO1P00395 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.53■■□□□ 1.52
MT-CO1P00395 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MT-CO1P00395 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.53■■□□□ 1.52
MT-CO1P00395 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
MT-CO1P00395 BHLHE23-202ENST00000612929 1109 ntBASIC24.53■■□□□ 1.52
MT-CO1P00395 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.53■■□□□ 1.52
MT-CO1P00395 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MT-CO1P00395 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
MT-CO1P00395 AC010980.1-201ENST00000587192 1142 ntBASIC24.52■■□□□ 1.52
MT-CO1P00395 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MT-CO1P00395 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MT-CO1P00395 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
MT-CO1P00395 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.51■■□□□ 1.51
MT-CO1P00395 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
MT-CO1P00395 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
MT-CO1P00395 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.51■■□□□ 1.51
MT-CO1P00395 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MT-CO1P00395 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.51■■□□□ 1.51
MT-CO1P00395 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MT-CO1P00395 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MT-CO1P00395 AC139795.1-202ENST00000500444 432 ntBASIC24.5■■□□□ 1.51
MT-CO1P00395 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
MT-CO1P00395 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MT-CO1P00395 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
MT-CO1P00395 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.49■■□□□ 1.51
MT-CO1P00395 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
MT-CO1P00395 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.49■■□□□ 1.51
MT-CO1P00395 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
MT-CO1P00395 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.49■■□□□ 1.51
MT-CO1P00395 PVT1_1.1-201ENST00000615125 194 ntBASIC24.49■■□□□ 1.51
MT-CO1P00395 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
MT-CO1P00395 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
MT-CO1P00395 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
MT-CO1P00395 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
MT-CO1P00395 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.48■■□□□ 1.51
MT-CO1P00395 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
MT-CO1P00395 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
MT-CO1P00395 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.48■■□□□ 1.51
MT-CO1P00395 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
MT-CO1P00395 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
MT-CO1P00395 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.48■■□□□ 1.51
MT-CO1P00395 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.47■■□□□ 1.51
MT-CO1P00395 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.47■■□□□ 1.51
MT-CO1P00395 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
MT-CO1P00395 RPS2P7-201ENST00000447334 885 ntBASIC24.47■■□□□ 1.51
MT-CO1P00395 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.47■■□□□ 1.51
MT-CO1P00395 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.47■■□□□ 1.51
MT-CO1P00395 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.47■■□□□ 1.51
MT-CO1P00395 AC087393.1-201ENST00000582896 145 ntBASIC24.47■■□□□ 1.51
MT-CO1P00395 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
MT-CO1P00395 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
MT-CO1P00395 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms