Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
LTN1O94822 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
LTN1O94822 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
LTN1O94822 BX664725.1-201ENST00000438252 379 ntBASIC32.54■■■□□ 2.8
LTN1O94822 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
LTN1O94822 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC32.53■■■□□ 2.8
LTN1O94822 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
LTN1O94822 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
LTN1O94822 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC32.53■■■□□ 2.8
LTN1O94822 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
LTN1O94822 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
LTN1O94822 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC32.52■■■□□ 2.8
LTN1O94822 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC32.52■■■□□ 2.8
LTN1O94822 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
LTN1O94822 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
LTN1O94822 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
LTN1O94822 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
LTN1O94822 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
LTN1O94822 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
LTN1O94822 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
LTN1O94822 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC32.5■■■□□ 2.79
LTN1O94822 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC32.49■■■□□ 2.79
LTN1O94822 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC32.49■■■□□ 2.79
LTN1O94822 UNC93B8-201ENST00000511903 705 ntBASIC32.49■■■□□ 2.79
LTN1O94822 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC32.49■■■□□ 2.79
LTN1O94822 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
LTN1O94822 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
LTN1O94822 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC32.48■■■□□ 2.79
LTN1O94822 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
LTN1O94822 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
LTN1O94822 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
LTN1O94822 BX255925.1-201ENST00000566954 1854 ntBASIC32.48■■■□□ 2.79
LTN1O94822 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
LTN1O94822 KRT16P3-201ENST00000439127 1283 ntBASIC32.47■■■□□ 2.79
LTN1O94822 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC32.47■■■□□ 2.79
LTN1O94822 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
LTN1O94822 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC32.47■■■□□ 2.79
LTN1O94822 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
LTN1O94822 KRT18P10-201ENST00000388836 1287 ntBASIC32.47■■■□□ 2.79
LTN1O94822 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
LTN1O94822 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
LTN1O94822 MIR4787-201ENST00000607364 84 ntBASIC32.46■■■□□ 2.79
LTN1O94822 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
LTN1O94822 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
LTN1O94822 MIR4281-201ENST00000580852 62 ntBASIC32.45■■■□□ 2.78
LTN1O94822 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
LTN1O94822 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
LTN1O94822 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC32.44■■■□□ 2.78
LTN1O94822 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
LTN1O94822 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
LTN1O94822 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC32.44■■■□□ 2.78
LTN1O94822 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
LTN1O94822 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC32.44■■■□□ 2.78
LTN1O94822 LSM7-203ENST00000585409 512 ntTSL 2 BASIC32.42■■■□□ 2.78
LTN1O94822 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
LTN1O94822 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
LTN1O94822 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
LTN1O94822 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
LTN1O94822 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
LTN1O94822 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
LTN1O94822 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
LTN1O94822 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
LTN1O94822 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
LTN1O94822 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
LTN1O94822 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC32.4■■■□□ 2.78
LTN1O94822 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC32.4■■■□□ 2.78
LTN1O94822 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
LTN1O94822 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
LTN1O94822 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
LTN1O94822 KRT125P-201ENST00000546827 989 ntBASIC32.39■■■□□ 2.78
LTN1O94822 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
LTN1O94822 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
LTN1O94822 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
LTN1O94822 KRT18P24-201ENST00000344739 1156 ntBASIC32.38■■■□□ 2.77
LTN1O94822 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
LTN1O94822 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
LTN1O94822 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC32.37■■■□□ 2.77
LTN1O94822 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC32.37■■■□□ 2.77
LTN1O94822 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
LTN1O94822 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
LTN1O94822 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC32.37■■■□□ 2.77
LTN1O94822 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
LTN1O94822 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
LTN1O94822 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
LTN1O94822 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC32.36■■■□□ 2.77
LTN1O94822 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC32.36■■■□□ 2.77
LTN1O94822 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC32.35■■■□□ 2.77
LTN1O94822 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC32.35■■■□□ 2.77
LTN1O94822 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
LTN1O94822 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.35■■■□□ 2.77
LTN1O94822 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC32.35■■■□□ 2.77
LTN1O94822 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
LTN1O94822 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC32.35■■■□□ 2.77
LTN1O94822 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
LTN1O94822 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC32.34■■■□□ 2.77
LTN1O94822 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC32.34■■■□□ 2.77
LTN1O94822 AC137630.3-201ENST00000607245 391 ntBASIC32.34■■■□□ 2.77
LTN1O94822 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
LTN1O94822 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
LTN1O94822 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms