Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SHISA7A6NL88 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SHISA7A6NL88 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SHISA7A6NL88 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SHISA7A6NL88 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
SHISA7A6NL88 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SHISA7A6NL88 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
SHISA7A6NL88 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHISA7A6NL88 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHISA7A6NL88 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SHISA7A6NL88 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.65■■□□□ 1.54
SHISA7A6NL88 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHISA7A6NL88 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHISA7A6NL88 AC120024.1-201ENST00000562672 995 ntBASIC24.64■■□□□ 1.54
SHISA7A6NL88 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SHISA7A6NL88 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
SHISA7A6NL88 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHISA7A6NL88 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.63■■□□□ 1.53
SHISA7A6NL88 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.63■■□□□ 1.53
SHISA7A6NL88 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.63■■□□□ 1.53
SHISA7A6NL88 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.63■■□□□ 1.53
SHISA7A6NL88 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHISA7A6NL88 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHISA7A6NL88 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHISA7A6NL88 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHISA7A6NL88 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHISA7A6NL88 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHISA7A6NL88 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHISA7A6NL88 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.62■■□□□ 1.53
SHISA7A6NL88 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHISA7A6NL88 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHISA7A6NL88 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHISA7A6NL88 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SHISA7A6NL88 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SHISA7A6NL88 KRT18P10-201ENST00000388836 1287 ntBASIC24.61■■□□□ 1.53
SHISA7A6NL88 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SHISA7A6NL88 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.61■■□□□ 1.53
SHISA7A6NL88 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHISA7A6NL88 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHISA7A6NL88 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SHISA7A6NL88 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
SHISA7A6NL88 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.6■■□□□ 1.53
SHISA7A6NL88 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.6■■□□□ 1.53
SHISA7A6NL88 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.59■■□□□ 1.53
SHISA7A6NL88 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SHISA7A6NL88 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.59■■□□□ 1.53
SHISA7A6NL88 TSPY9P-201ENST00000440215 945 ntBASIC24.59■■□□□ 1.53
SHISA7A6NL88 TSPY11P-201ENST00000442607 1045 ntBASIC24.59■■□□□ 1.53
SHISA7A6NL88 AC131281.2-201ENST00000520478 145 ntBASIC24.59■■□□□ 1.53
SHISA7A6NL88 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
SHISA7A6NL88 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SHISA7A6NL88 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SHISA7A6NL88 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHISA7A6NL88 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHISA7A6NL88 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHISA7A6NL88 AL139246.5-201ENST00000606645 996 ntBASIC24.57■■□□□ 1.52
SHISA7A6NL88 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.57■■□□□ 1.52
SHISA7A6NL88 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHISA7A6NL88 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SHISA7A6NL88 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHISA7A6NL88 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHISA7A6NL88 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.56■■□□□ 1.52
SHISA7A6NL88 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.56■■□□□ 1.52
SHISA7A6NL88 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.56■■□□□ 1.52
SHISA7A6NL88 AC092028.1-203ENST00000608262 953 ntBASIC24.56■■□□□ 1.52
SHISA7A6NL88 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHISA7A6NL88 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHISA7A6NL88 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SHISA7A6NL88 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHISA7A6NL88 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.55■■□□□ 1.52
SHISA7A6NL88 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.55■■□□□ 1.52
SHISA7A6NL88 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.55■■□□□ 1.52
SHISA7A6NL88 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.55■■□□□ 1.52
SHISA7A6NL88 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHISA7A6NL88 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHISA7A6NL88 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SHISA7A6NL88 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.54■■□□□ 1.52
SHISA7A6NL88 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
SHISA7A6NL88 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHISA7A6NL88 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.54■■□□□ 1.52
SHISA7A6NL88 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHISA7A6NL88 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHISA7A6NL88 DRD5P2-201ENST00000421395 2012 ntBASIC24.54■■□□□ 1.52
SHISA7A6NL88 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHISA7A6NL88 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
SHISA7A6NL88 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.53■■□□□ 1.52
SHISA7A6NL88 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHISA7A6NL88 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
SHISA7A6NL88 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHISA7A6NL88 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.53■■□□□ 1.52
SHISA7A6NL88 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHISA7A6NL88 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
SHISA7A6NL88 BX255925.1-201ENST00000566954 1854 ntBASIC24.52■■□□□ 1.52
SHISA7A6NL88 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.52■■□□□ 1.52
SHISA7A6NL88 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.52■■□□□ 1.52
SHISA7A6NL88 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
SHISA7A6NL88 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHISA7A6NL88 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHISA7A6NL88 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SHISA7A6NL88 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms