Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC36.05■■■■□ 3.36
HFM1A2PYH4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
HFM1A2PYH4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC36.03■■■■□ 3.36
HFM1A2PYH4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
HFM1A2PYH4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC36.02■■■■□ 3.36
HFM1A2PYH4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
HFM1A2PYH4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC36.02■■■■□ 3.36
HFM1A2PYH4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
HFM1A2PYH4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
HFM1A2PYH4 AC010980.1-201ENST00000587192 1142 ntBASIC36.01■■■■□ 3.36
HFM1A2PYH4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC36.01■■■■□ 3.35
HFM1A2PYH4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
HFM1A2PYH4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC36■■■■□ 3.35
HFM1A2PYH4 AC074183.2-201ENST00000623112 922 ntBASIC36■■■■□ 3.35
HFM1A2PYH4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC36■■■■□ 3.35
HFM1A2PYH4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC36■■■■□ 3.35
HFM1A2PYH4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC36■■■■□ 3.35
HFM1A2PYH4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC35.99■■■■□ 3.35
HFM1A2PYH4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC35.99■■■■□ 3.35
HFM1A2PYH4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
HFM1A2PYH4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC35.99■■■■□ 3.35
HFM1A2PYH4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
HFM1A2PYH4 RARRES2P1-201ENST00000474487 481 ntBASIC35.99■■■■□ 3.35
HFM1A2PYH4 HYI-210ENST00000486909 905 ntTSL 5 BASIC35.99■■■■□ 3.35
HFM1A2PYH4 AC139795.1-202ENST00000500444 432 ntBASIC35.99■■■■□ 3.35
HFM1A2PYH4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC35.98■■■■□ 3.35
HFM1A2PYH4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
HFM1A2PYH4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
HFM1A2PYH4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
HFM1A2PYH4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
HFM1A2PYH4 AC019171.1-201ENST00000601251 1056 ntBASIC35.97■■■■□ 3.35
HFM1A2PYH4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
HFM1A2PYH4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
HFM1A2PYH4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
HFM1A2PYH4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC35.96■■■■□ 3.35
HFM1A2PYH4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
HFM1A2PYH4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
HFM1A2PYH4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
HFM1A2PYH4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC35.96■■■■□ 3.35
HFM1A2PYH4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC35.96■■■■□ 3.35
HFM1A2PYH4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC35.96■■■■□ 3.35
HFM1A2PYH4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC35.96■■■■□ 3.35
HFM1A2PYH4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
HFM1A2PYH4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC35.95■■■■□ 3.35
HFM1A2PYH4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
HFM1A2PYH4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC35.95■■■■□ 3.34
HFM1A2PYH4 KRT18P10-201ENST00000388836 1287 ntBASIC35.94■■■■□ 3.34
HFM1A2PYH4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC35.94■■■■□ 3.34
HFM1A2PYH4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC35.94■■■■□ 3.34
HFM1A2PYH4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
HFM1A2PYH4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC35.93■■■■□ 3.34
HFM1A2PYH4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC35.93■■■■□ 3.34
HFM1A2PYH4 LONRF2P2-201ENST00000439212 571 ntBASIC35.93■■■■□ 3.34
HFM1A2PYH4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
HFM1A2PYH4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
HFM1A2PYH4 AC103834.1-201ENST00000520383 144 ntBASIC35.92■■■■□ 3.34
HFM1A2PYH4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC35.92■■■■□ 3.34
HFM1A2PYH4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
HFM1A2PYH4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC35.92■■■■□ 3.34
HFM1A2PYH4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC35.92■■■■□ 3.34
HFM1A2PYH4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC35.91■■■■□ 3.34
HFM1A2PYH4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
HFM1A2PYH4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC35.91■■■■□ 3.34
HFM1A2PYH4 AC096887.2-201ENST00000623443 1957 ntBASIC35.91■■■■□ 3.34
HFM1A2PYH4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC35.91■■■■□ 3.34
HFM1A2PYH4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
HFM1A2PYH4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC35.9■■■■□ 3.34
HFM1A2PYH4 MIR4508-201ENST00000584178 70 ntBASIC35.9■■■■□ 3.34
HFM1A2PYH4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC35.9■■■■□ 3.34
HFM1A2PYH4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC35.9■■■■□ 3.34
HFM1A2PYH4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC35.89■■■■□ 3.34
HFM1A2PYH4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
HFM1A2PYH4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
HFM1A2PYH4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC35.89■■■■□ 3.34
HFM1A2PYH4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC35.89■■■■□ 3.34
HFM1A2PYH4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
HFM1A2PYH4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC35.88■■■■□ 3.33
HFM1A2PYH4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC35.88■■■■□ 3.33
HFM1A2PYH4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC35.87■■■■□ 3.33
HFM1A2PYH4 ERN1-208ENST00000606895 2068 ntBASIC35.87■■■■□ 3.33
HFM1A2PYH4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
HFM1A2PYH4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC35.87■■■■□ 3.33
HFM1A2PYH4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC35.87■■■■□ 3.33
HFM1A2PYH4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC35.86■■■■□ 3.33
HFM1A2PYH4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
HFM1A2PYH4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC35.86■■■■□ 3.33
HFM1A2PYH4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
HFM1A2PYH4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC35.86■■■■□ 3.33
HFM1A2PYH4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
HFM1A2PYH4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC35.86■■■■□ 3.33
HFM1A2PYH4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
HFM1A2PYH4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
HFM1A2PYH4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC35.85■■■■□ 3.33
HFM1A2PYH4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
HFM1A2PYH4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
HFM1A2PYH4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
HFM1A2PYH4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
HFM1A2PYH4 BHLHE23-202ENST00000612929 1109 ntBASIC35.85■■■■□ 3.33
HFM1A2PYH4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
HFM1A2PYH4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC35.85■■■■□ 3.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms