Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.59■■□□□ 1.05
TRGV8A0A0C4DH27 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRGV8A0A0C4DH27 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TRGV8A0A0C4DH27 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRGV8A0A0C4DH27 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
TRGV8A0A0C4DH27 KRT16P3-201ENST00000439127 1283 ntBASIC21.58■■□□□ 1.05
TRGV8A0A0C4DH27 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TRGV8A0A0C4DH27 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRGV8A0A0C4DH27 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRGV8A0A0C4DH27 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.57■■□□□ 1.04
TRGV8A0A0C4DH27 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.57■■□□□ 1.04
TRGV8A0A0C4DH27 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.57■■□□□ 1.04
TRGV8A0A0C4DH27 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.57■■□□□ 1.04
TRGV8A0A0C4DH27 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.57■■□□□ 1.04
TRGV8A0A0C4DH27 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRGV8A0A0C4DH27 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.57■■□□□ 1.04
TRGV8A0A0C4DH27 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.56■■□□□ 1.04
TRGV8A0A0C4DH27 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRGV8A0A0C4DH27 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRGV8A0A0C4DH27 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRGV8A0A0C4DH27 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 MIR935-201ENST00000401179 91 ntBASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 UNC93B8-201ENST00000511903 705 ntBASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV8A0A0C4DH27 AL449106.1-201ENST00000608517 1980 ntBASIC21.54■■□□□ 1.04
TRGV8A0A0C4DH27 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRGV8A0A0C4DH27 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.54■■□□□ 1.04
TRGV8A0A0C4DH27 TSPY9P-201ENST00000440215 945 ntBASIC21.54■■□□□ 1.04
TRGV8A0A0C4DH27 TSPY11P-201ENST00000442607 1045 ntBASIC21.54■■□□□ 1.04
TRGV8A0A0C4DH27 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.54■■□□□ 1.04
TRGV8A0A0C4DH27 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRGV8A0A0C4DH27 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV8A0A0C4DH27 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV8A0A0C4DH27 KRT18P24-201ENST00000344739 1156 ntBASIC21.53■■□□□ 1.04
TRGV8A0A0C4DH27 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV8A0A0C4DH27 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.53■■□□□ 1.04
TRGV8A0A0C4DH27 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV8A0A0C4DH27 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.53■■□□□ 1.04
TRGV8A0A0C4DH27 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
TRGV8A0A0C4DH27 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV8A0A0C4DH27 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV8A0A0C4DH27 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
TRGV8A0A0C4DH27 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRGV8A0A0C4DH27 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
TRGV8A0A0C4DH27 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRGV8A0A0C4DH27 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.51■■□□□ 1.03
TRGV8A0A0C4DH27 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRGV8A0A0C4DH27 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
TRGV8A0A0C4DH27 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRGV8A0A0C4DH27 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRGV8A0A0C4DH27 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRGV8A0A0C4DH27 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRGV8A0A0C4DH27 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRGV8A0A0C4DH27 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.49■■□□□ 1.03
TRGV8A0A0C4DH27 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRGV8A0A0C4DH27 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TRGV8A0A0C4DH27 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRGV8A0A0C4DH27 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRGV8A0A0C4DH27 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.48■■□□□ 1.03
TRGV8A0A0C4DH27 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.48■■□□□ 1.03
TRGV8A0A0C4DH27 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.47■■□□□ 1.03
TRGV8A0A0C4DH27 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
TRGV8A0A0C4DH27 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.47■■□□□ 1.03
TRGV8A0A0C4DH27 AC120024.1-201ENST00000562672 995 ntBASIC21.47■■□□□ 1.03
TRGV8A0A0C4DH27 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRGV8A0A0C4DH27 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 AC137630.3-201ENST00000607245 391 ntBASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.46■■□□□ 1.03
TRGV8A0A0C4DH27 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.45■■□□□ 1.02
TRGV8A0A0C4DH27 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TRGV8A0A0C4DH27 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TRGV8A0A0C4DH27 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.45■■□□□ 1.02
TRGV8A0A0C4DH27 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV8A0A0C4DH27 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRGV8A0A0C4DH27 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRGV8A0A0C4DH27 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.44■■□□□ 1.02
TRGV8A0A0C4DH27 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV8A0A0C4DH27 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV8A0A0C4DH27 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV8A0A0C4DH27 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV8A0A0C4DH27 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms