Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ECEL1P2-201ENST00000461596 1295 ntBASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SAA2-SAA4A0A096LPE2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.73
SAA2-SAA4A0A096LPE2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SAA2-SAA4A0A096LPE2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.58■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 GPX1-201ENST00000419349 1106 ntBASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 RP9P-202ENST00000450133 1212 ntBASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AC093536.1-201ENST00000569153 554 ntBASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AC007029.1-201ENST00000604183 313 ntBASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SAA2-SAA4A0A096LPE2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms