Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.64■□□□□ 0.73
SAA2-SAA4A0A096LPE2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SAA2-SAA4A0A096LPE2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SAA2-SAA4A0A096LPE2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ECEL1P2-201ENST00000461596 1295 ntBASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SAA2-SAA4A0A096LPE2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SAA2-SAA4A0A096LPE2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SAA2-SAA4A0A096LPE2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.73
SAA2-SAA4A0A096LPE2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SAA2-SAA4A0A096LPE2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SAA2-SAA4A0A096LPE2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.58■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SAA2-SAA4A0A096LPE2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 GPX1-201ENST00000419349 1106 ntBASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.56■□□□□ 0.72
SAA2-SAA4A0A096LPE2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 RP9P-202ENST00000450133 1212 ntBASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SAA2-SAA4A0A096LPE2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SAA2-SAA4A0A096LPE2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AC093536.1-201ENST00000569153 554 ntBASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 AC007029.1-201ENST00000604183 313 ntBASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SAA2-SAA4A0A096LPE2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SAA2-SAA4A0A096LPE2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms