Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC41.21■■■■■ 4.19
BIVM-ERCC5R4GMW8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC41.2■■■■■ 4.19
BIVM-ERCC5R4GMW8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
BIVM-ERCC5R4GMW8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC41.19■■■■■ 4.18
BIVM-ERCC5R4GMW8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC41.19■■■■■ 4.18
BIVM-ERCC5R4GMW8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC41.19■■■■■ 4.18
BIVM-ERCC5R4GMW8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC41.18■■■■■ 4.18
BIVM-ERCC5R4GMW8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC41.18■■■■■ 4.18
BIVM-ERCC5R4GMW8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC41.18■■■■■ 4.18
BIVM-ERCC5R4GMW8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
BIVM-ERCC5R4GMW8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC41.18■■■■■ 4.18
BIVM-ERCC5R4GMW8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC41.16■■■■■ 4.18
BIVM-ERCC5R4GMW8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC41.16■■■■■ 4.18
BIVM-ERCC5R4GMW8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC41.15■■■■■ 4.18
BIVM-ERCC5R4GMW8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC41.15■■■■■ 4.18
BIVM-ERCC5R4GMW8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC41.15■■■■■ 4.18
BIVM-ERCC5R4GMW8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC41.15■■■■■ 4.18
BIVM-ERCC5R4GMW8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC41.14■■■■■ 4.18
BIVM-ERCC5R4GMW8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.17
BIVM-ERCC5R4GMW8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.17
BIVM-ERCC5R4GMW8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC41.11■■■■■ 4.17
BIVM-ERCC5R4GMW8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
BIVM-ERCC5R4GMW8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC41.11■■■■■ 4.17
BIVM-ERCC5R4GMW8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC41.11■■■■■ 4.17
BIVM-ERCC5R4GMW8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
BIVM-ERCC5R4GMW8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC41.11■■■■■ 4.17
BIVM-ERCC5R4GMW8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC41.11■■■■■ 4.17
BIVM-ERCC5R4GMW8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC41.11■■■■■ 4.17
BIVM-ERCC5R4GMW8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC41.11■■■■■ 4.17
BIVM-ERCC5R4GMW8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC41.1■■■■■ 4.17
BIVM-ERCC5R4GMW8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC41.1■■■■■ 4.17
BIVM-ERCC5R4GMW8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC41.1■■■■■ 4.17
BIVM-ERCC5R4GMW8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC41.1■■■■■ 4.17
BIVM-ERCC5R4GMW8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC41.1■■■■■ 4.17
BIVM-ERCC5R4GMW8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC41.1■■■■■ 4.17
BIVM-ERCC5R4GMW8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
BIVM-ERCC5R4GMW8 LINC01003-201ENST00000564834 1764 ntBASIC41.07■■■■■ 4.17
BIVM-ERCC5R4GMW8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC41.07■■■■■ 4.17
BIVM-ERCC5R4GMW8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC41.07■■■■■ 4.16
BIVM-ERCC5R4GMW8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC41.07■■■■■ 4.16
BIVM-ERCC5R4GMW8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.16
BIVM-ERCC5R4GMW8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC41.07■■■■■ 4.16
BIVM-ERCC5R4GMW8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC41.07■■■■■ 4.16
BIVM-ERCC5R4GMW8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC41.07■■■■■ 4.16
BIVM-ERCC5R4GMW8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC41.06■■■■■ 4.16
BIVM-ERCC5R4GMW8 AC239859.2-201ENST00000444165 318 ntBASIC41.06■■■■■ 4.16
BIVM-ERCC5R4GMW8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC41.06■■■■■ 4.16
BIVM-ERCC5R4GMW8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC41.05■■■■■ 4.16
BIVM-ERCC5R4GMW8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC41.04■■■■■ 4.16
BIVM-ERCC5R4GMW8 AC022616.5-201ENST00000518796 181 ntBASIC41.04■■■■■ 4.16
BIVM-ERCC5R4GMW8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC41.04■■■■■ 4.16
BIVM-ERCC5R4GMW8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC41.04■■■■■ 4.16
BIVM-ERCC5R4GMW8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC41.04■■■■■ 4.16
BIVM-ERCC5R4GMW8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC41.03■■■■■ 4.16
BIVM-ERCC5R4GMW8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC41.02■■■■■ 4.16
BIVM-ERCC5R4GMW8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC41.02■■■■■ 4.16
BIVM-ERCC5R4GMW8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC41.02■■■■■ 4.16
BIVM-ERCC5R4GMW8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC41■■■■■ 4.15
BIVM-ERCC5R4GMW8 GRAMD4P7-201ENST00000578182 1232 ntBASIC41■■■■■ 4.15
BIVM-ERCC5R4GMW8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC41■■■■■ 4.15
BIVM-ERCC5R4GMW8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC41■■■■■ 4.15
BIVM-ERCC5R4GMW8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
BIVM-ERCC5R4GMW8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC40.99■■■■■ 4.15
BIVM-ERCC5R4GMW8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
BIVM-ERCC5R4GMW8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC40.99■■■■■ 4.15
BIVM-ERCC5R4GMW8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC40.99■■■■■ 4.15
BIVM-ERCC5R4GMW8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC40.98■■■■■ 4.15
BIVM-ERCC5R4GMW8 UNC93B8-201ENST00000511903 705 ntBASIC40.98■■■■■ 4.15
BIVM-ERCC5R4GMW8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC40.98■■■■■ 4.15
BIVM-ERCC5R4GMW8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC40.98■■■■■ 4.15
BIVM-ERCC5R4GMW8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC40.98■■■■■ 4.15
BIVM-ERCC5R4GMW8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC40.97■■■■■ 4.15
BIVM-ERCC5R4GMW8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC40.97■■■■■ 4.15
BIVM-ERCC5R4GMW8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC40.97■■■■■ 4.15
BIVM-ERCC5R4GMW8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC40.96■■■■■ 4.15
BIVM-ERCC5R4GMW8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC40.96■■■■■ 4.15
BIVM-ERCC5R4GMW8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC40.96■■■■■ 4.15
BIVM-ERCC5R4GMW8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC40.96■■■■■ 4.15
BIVM-ERCC5R4GMW8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC40.96■■■■■ 4.15
BIVM-ERCC5R4GMW8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC40.96■■■■■ 4.15
BIVM-ERCC5R4GMW8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC40.96■■■■■ 4.15
BIVM-ERCC5R4GMW8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC40.96■■■■■ 4.15
BIVM-ERCC5R4GMW8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC40.95■■■■■ 4.15
BIVM-ERCC5R4GMW8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC40.95■■■■■ 4.15
BIVM-ERCC5R4GMW8 BX664725.1-201ENST00000438252 379 ntBASIC40.95■■■■■ 4.15
BIVM-ERCC5R4GMW8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC40.94■■■■■ 4.14
BIVM-ERCC5R4GMW8 AC142472.1-201ENST00000612013 1741 ntBASIC40.94■■■■■ 4.14
BIVM-ERCC5R4GMW8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC40.94■■■■■ 4.14
BIVM-ERCC5R4GMW8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC40.93■■■■■ 4.14
BIVM-ERCC5R4GMW8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC40.93■■■■■ 4.14
BIVM-ERCC5R4GMW8 KRT18P10-201ENST00000388836 1287 ntBASIC40.93■■■■■ 4.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms