Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MRPS28Q9Y2Q9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
MRPS28Q9Y2Q9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
MRPS28Q9Y2Q9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MRPS28Q9Y2Q9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MRPS28Q9Y2Q9 AC096887.2-201ENST00000623443 1957 ntBASIC20.72■□□□□ 0.91
MRPS28Q9Y2Q9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
MRPS28Q9Y2Q9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.72■□□□□ 0.91
MRPS28Q9Y2Q9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPS28Q9Y2Q9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPS28Q9Y2Q9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MRPS28Q9Y2Q9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
MRPS28Q9Y2Q9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
MRPS28Q9Y2Q9 DUX4L11-201ENST00000611504 1267 ntBASIC20.71■□□□□ 0.91
MRPS28Q9Y2Q9 DUX4L12-201ENST00000614593 1267 ntBASIC20.71■□□□□ 0.91
MRPS28Q9Y2Q9 DUX4L14-201ENST00000621227 1267 ntBASIC20.71■□□□□ 0.91
MRPS28Q9Y2Q9 AL359258.2-201ENST00000564063 1566 ntBASIC20.71■□□□□ 0.91
MRPS28Q9Y2Q9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
MRPS28Q9Y2Q9 AC022211.4-201ENST00000625094 2161 ntBASIC20.7■□□□□ 0.91
MRPS28Q9Y2Q9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MRPS28Q9Y2Q9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MRPS28Q9Y2Q9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MRPS28Q9Y2Q9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MRPS28Q9Y2Q9 RPS2P35-201ENST00000443417 897 ntBASIC20.69■□□□□ 0.9
MRPS28Q9Y2Q9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MRPS28Q9Y2Q9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPS28Q9Y2Q9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.68■□□□□ 0.9
MRPS28Q9Y2Q9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MRPS28Q9Y2Q9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MRPS28Q9Y2Q9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.68■□□□□ 0.9
MRPS28Q9Y2Q9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.68■□□□□ 0.9
MRPS28Q9Y2Q9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MRPS28Q9Y2Q9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.68■□□□□ 0.9
MRPS28Q9Y2Q9 AL359504.2-201ENST00000605506 1601 ntBASIC20.67■□□□□ 0.9
MRPS28Q9Y2Q9 AC138932.3-201ENST00000567634 1902 ntBASIC20.67■□□□□ 0.9
MRPS28Q9Y2Q9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.67■□□□□ 0.9
MRPS28Q9Y2Q9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MRPS28Q9Y2Q9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MRPS28Q9Y2Q9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.67■□□□□ 0.9
MRPS28Q9Y2Q9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MRPS28Q9Y2Q9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.67■□□□□ 0.9
MRPS28Q9Y2Q9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MRPS28Q9Y2Q9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MRPS28Q9Y2Q9 HLA-V-202ENST00000446817 847 ntBASIC20.66■□□□□ 0.9
MRPS28Q9Y2Q9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MRPS28Q9Y2Q9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MRPS28Q9Y2Q9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MRPS28Q9Y2Q9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MRPS28Q9Y2Q9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MRPS28Q9Y2Q9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.66■□□□□ 0.9
MRPS28Q9Y2Q9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRPS28Q9Y2Q9 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.65■□□□□ 0.9
MRPS28Q9Y2Q9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.65■□□□□ 0.9
MRPS28Q9Y2Q9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRPS28Q9Y2Q9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.64■□□□□ 0.89
MRPS28Q9Y2Q9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPS28Q9Y2Q9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPS28Q9Y2Q9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPS28Q9Y2Q9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
MRPS28Q9Y2Q9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPS28Q9Y2Q9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPS28Q9Y2Q9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPS28Q9Y2Q9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.64■□□□□ 0.89
MRPS28Q9Y2Q9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPS28Q9Y2Q9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPS28Q9Y2Q9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
MRPS28Q9Y2Q9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPS28Q9Y2Q9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPS28Q9Y2Q9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRPS28Q9Y2Q9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRPS28Q9Y2Q9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPS28Q9Y2Q9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPS28Q9Y2Q9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.61■□□□□ 0.89
MRPS28Q9Y2Q9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPS28Q9Y2Q9 AL139125.2-201ENST00000623134 1869 ntBASIC20.6■□□□□ 0.89
MRPS28Q9Y2Q9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRPS28Q9Y2Q9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
MRPS28Q9Y2Q9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms