Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBFOX1Q9NWB1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.2■□□□□ 0.98
RBFOX1Q9NWB1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBFOX1Q9NWB1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RBFOX1Q9NWB1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBFOX1Q9NWB1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.19■□□□□ 0.98
RBFOX1Q9NWB1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RBFOX1Q9NWB1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBFOX1Q9NWB1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RBFOX1Q9NWB1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBFOX1Q9NWB1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
RBFOX1Q9NWB1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBFOX1Q9NWB1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBFOX1Q9NWB1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
RBFOX1Q9NWB1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RBFOX1Q9NWB1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RBFOX1Q9NWB1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBFOX1Q9NWB1 AC079834.2-201ENST00000609776 1949 ntBASIC21.17■□□□□ 0.98
RBFOX1Q9NWB1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RBFOX1Q9NWB1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RBFOX1Q9NWB1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.17■□□□□ 0.98
RBFOX1Q9NWB1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.17■□□□□ 0.98
RBFOX1Q9NWB1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.17■□□□□ 0.98
RBFOX1Q9NWB1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBFOX1Q9NWB1 AP004609.3-201ENST00000610705 1884 ntBASIC21.17■□□□□ 0.98
RBFOX1Q9NWB1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.16■□□□□ 0.98
RBFOX1Q9NWB1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RBFOX1Q9NWB1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.16■□□□□ 0.98
RBFOX1Q9NWB1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RBFOX1Q9NWB1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RBFOX1Q9NWB1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBFOX1Q9NWB1 AC068473.5-201ENST00000616428 2072 ntBASIC21.15■□□□□ 0.98
RBFOX1Q9NWB1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBFOX1Q9NWB1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBFOX1Q9NWB1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.14■□□□□ 0.97
RBFOX1Q9NWB1 LINC01971-201ENST00000617888 1048 ntBASIC21.14■□□□□ 0.97
RBFOX1Q9NWB1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RBFOX1Q9NWB1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBFOX1Q9NWB1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBFOX1Q9NWB1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.14■□□□□ 0.97
RBFOX1Q9NWB1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.14■□□□□ 0.97
RBFOX1Q9NWB1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RBFOX1Q9NWB1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RBFOX1Q9NWB1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.13■□□□□ 0.97
RBFOX1Q9NWB1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RBFOX1Q9NWB1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RBFOX1Q9NWB1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RBFOX1Q9NWB1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RBFOX1Q9NWB1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBFOX1Q9NWB1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.12■□□□□ 0.97
RBFOX1Q9NWB1 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.12■□□□□ 0.97
RBFOX1Q9NWB1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBFOX1Q9NWB1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBFOX1Q9NWB1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBFOX1Q9NWB1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBFOX1Q9NWB1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBFOX1Q9NWB1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBFOX1Q9NWB1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBFOX1Q9NWB1 AC138932.3-201ENST00000567634 1902 ntBASIC21.1■□□□□ 0.97
RBFOX1Q9NWB1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBFOX1Q9NWB1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBFOX1Q9NWB1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RBFOX1Q9NWB1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBFOX1Q9NWB1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBFOX1Q9NWB1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.1■□□□□ 0.97
RBFOX1Q9NWB1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBFOX1Q9NWB1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RBFOX1Q9NWB1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.09■□□□□ 0.97
RBFOX1Q9NWB1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBFOX1Q9NWB1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBFOX1Q9NWB1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBFOX1Q9NWB1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RBFOX1Q9NWB1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RBFOX1Q9NWB1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RBFOX1Q9NWB1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBFOX1Q9NWB1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBFOX1Q9NWB1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RBFOX1Q9NWB1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.08■□□□□ 0.97
RBFOX1Q9NWB1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.08■□□□□ 0.97
RBFOX1Q9NWB1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.08■□□□□ 0.96
RBFOX1Q9NWB1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBFOX1Q9NWB1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBFOX1Q9NWB1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RBFOX1Q9NWB1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RBFOX1Q9NWB1 AC022211.4-201ENST00000625094 2161 ntBASIC21.07■□□□□ 0.96
RBFOX1Q9NWB1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.07■□□□□ 0.96
RBFOX1Q9NWB1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RBFOX1Q9NWB1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RBFOX1Q9NWB1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RBFOX1Q9NWB1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.06■□□□□ 0.96
RBFOX1Q9NWB1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.06■□□□□ 0.96
RBFOX1Q9NWB1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.06■□□□□ 0.96
RBFOX1Q9NWB1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RBFOX1Q9NWB1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
RBFOX1Q9NWB1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L13-201ENST00000554103 1267 ntBASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L15-201ENST00000611059 1267 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms