Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM4CQ9H3R0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
KDM4CQ9H3R0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
KDM4CQ9H3R0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.04■■□□□ 1.6
KDM4CQ9H3R0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.04■■□□□ 1.6
KDM4CQ9H3R0 U85056.1-201ENST00000616429 682 ntBASIC25.04■■□□□ 1.6
KDM4CQ9H3R0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
KDM4CQ9H3R0 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.04■■□□□ 1.6
KDM4CQ9H3R0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.04■■□□□ 1.6
KDM4CQ9H3R0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
KDM4CQ9H3R0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
KDM4CQ9H3R0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
KDM4CQ9H3R0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
KDM4CQ9H3R0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
KDM4CQ9H3R0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
KDM4CQ9H3R0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
KDM4CQ9H3R0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.03■■□□□ 1.6
KDM4CQ9H3R0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
KDM4CQ9H3R0 AL359258.2-201ENST00000564063 1566 ntBASIC25.02■■□□□ 1.6
KDM4CQ9H3R0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.02■■□□□ 1.6
KDM4CQ9H3R0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.02■■□□□ 1.6
KDM4CQ9H3R0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
KDM4CQ9H3R0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
KDM4CQ9H3R0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
KDM4CQ9H3R0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
KDM4CQ9H3R0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
KDM4CQ9H3R0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.01■■□□□ 1.59
KDM4CQ9H3R0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
KDM4CQ9H3R0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.01■■□□□ 1.59
KDM4CQ9H3R0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
KDM4CQ9H3R0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
KDM4CQ9H3R0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25■■□□□ 1.59
KDM4CQ9H3R0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KDM4CQ9H3R0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25■■□□□ 1.59
KDM4CQ9H3R0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25■■□□□ 1.59
KDM4CQ9H3R0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25■■□□□ 1.59
KDM4CQ9H3R0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KDM4CQ9H3R0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25■■□□□ 1.59
KDM4CQ9H3R0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KDM4CQ9H3R0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KDM4CQ9H3R0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
KDM4CQ9H3R0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.98■■□□□ 1.59
KDM4CQ9H3R0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KDM4CQ9H3R0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
KDM4CQ9H3R0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KDM4CQ9H3R0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KDM4CQ9H3R0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KDM4CQ9H3R0 AC007029.1-201ENST00000604183 313 ntBASIC24.97■■□□□ 1.59
KDM4CQ9H3R0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
KDM4CQ9H3R0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KDM4CQ9H3R0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KDM4CQ9H3R0 AC018358.1-201ENST00000631079 1402 ntBASIC24.96■■□□□ 1.59
KDM4CQ9H3R0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
KDM4CQ9H3R0 SMPD5-203ENST00000639008 1464 ntBASIC24.96■■□□□ 1.59
KDM4CQ9H3R0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.95■■□□□ 1.59
KDM4CQ9H3R0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
KDM4CQ9H3R0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
KDM4CQ9H3R0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.94■■□□□ 1.58
KDM4CQ9H3R0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.94■■□□□ 1.58
KDM4CQ9H3R0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
KDM4CQ9H3R0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KDM4CQ9H3R0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.93■■□□□ 1.58
KDM4CQ9H3R0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
KDM4CQ9H3R0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
KDM4CQ9H3R0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
KDM4CQ9H3R0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
KDM4CQ9H3R0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
KDM4CQ9H3R0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
KDM4CQ9H3R0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KDM4CQ9H3R0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
KDM4CQ9H3R0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.91■■□□□ 1.58
KDM4CQ9H3R0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
KDM4CQ9H3R0 KRT18P60-201ENST00000312876 1297 ntBASIC24.91■■□□□ 1.58
KDM4CQ9H3R0 AC025884.2-201ENST00000553429 711 ntBASIC24.91■■□□□ 1.58
KDM4CQ9H3R0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
KDM4CQ9H3R0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.91■■□□□ 1.58
KDM4CQ9H3R0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KDM4CQ9H3R0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.9■■□□□ 1.58
KDM4CQ9H3R0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
KDM4CQ9H3R0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.9■■□□□ 1.58
KDM4CQ9H3R0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
KDM4CQ9H3R0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.89■■□□□ 1.58
KDM4CQ9H3R0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms