Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.27■■□□□ 1.16
POLR2J3Q9H1A7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
POLR2J3Q9H1A7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.27■■□□□ 1.16
POLR2J3Q9H1A7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
POLR2J3Q9H1A7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
POLR2J3Q9H1A7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
POLR2J3Q9H1A7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
POLR2J3Q9H1A7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
POLR2J3Q9H1A7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
POLR2J3Q9H1A7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
POLR2J3Q9H1A7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
POLR2J3Q9H1A7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.25■■□□□ 1.15
POLR2J3Q9H1A7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
POLR2J3Q9H1A7 AC126177.7-201ENST00000547904 679 ntBASIC22.25■■□□□ 1.15
POLR2J3Q9H1A7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
POLR2J3Q9H1A7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
POLR2J3Q9H1A7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
POLR2J3Q9H1A7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.23■■□□□ 1.15
POLR2J3Q9H1A7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR2J3Q9H1A7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR2J3Q9H1A7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.22■■□□□ 1.15
POLR2J3Q9H1A7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POLR2J3Q9H1A7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.22■■□□□ 1.15
POLR2J3Q9H1A7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.22■■□□□ 1.15
POLR2J3Q9H1A7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.21■■□□□ 1.15
POLR2J3Q9H1A7 AL359504.2-201ENST00000605506 1601 ntBASIC22.21■■□□□ 1.15
POLR2J3Q9H1A7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
POLR2J3Q9H1A7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.21■■□□□ 1.15
POLR2J3Q9H1A7 CR559946.2-201ENST00000623684 991 ntBASIC22.21■■□□□ 1.15
POLR2J3Q9H1A7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
POLR2J3Q9H1A7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
POLR2J3Q9H1A7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.2■■□□□ 1.14
POLR2J3Q9H1A7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR2J3Q9H1A7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.2■■□□□ 1.14
POLR2J3Q9H1A7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR2J3Q9H1A7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR2J3Q9H1A7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
POLR2J3Q9H1A7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
POLR2J3Q9H1A7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
POLR2J3Q9H1A7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
POLR2J3Q9H1A7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.19■■□□□ 1.14
POLR2J3Q9H1A7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
POLR2J3Q9H1A7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.18■■□□□ 1.14
POLR2J3Q9H1A7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
POLR2J3Q9H1A7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
POLR2J3Q9H1A7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 AC142381.3-201ENST00000568208 1670 ntBASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.17■■□□□ 1.14
POLR2J3Q9H1A7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 ABHD17AP4-201ENST00000411545 909 ntBASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
POLR2J3Q9H1A7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
POLR2J3Q9H1A7 MIR3648-2-201ENST00000581792 180 ntBASIC22.15■■□□□ 1.14
POLR2J3Q9H1A7 MIR3648-1-201ENST00000615959 180 ntBASIC22.15■■□□□ 1.14
POLR2J3Q9H1A7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
POLR2J3Q9H1A7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
POLR2J3Q9H1A7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
POLR2J3Q9H1A7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
POLR2J3Q9H1A7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
POLR2J3Q9H1A7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
POLR2J3Q9H1A7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
POLR2J3Q9H1A7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.14■■□□□ 1.14
POLR2J3Q9H1A7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
POLR2J3Q9H1A7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
POLR2J3Q9H1A7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.14■■□□□ 1.13
POLR2J3Q9H1A7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
POLR2J3Q9H1A7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
POLR2J3Q9H1A7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.14■■□□□ 1.13
POLR2J3Q9H1A7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
POLR2J3Q9H1A7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.13■■□□□ 1.13
POLR2J3Q9H1A7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.13■■□□□ 1.13
POLR2J3Q9H1A7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
POLR2J3Q9H1A7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
POLR2J3Q9H1A7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
POLR2J3Q9H1A7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.12■■□□□ 1.13
POLR2J3Q9H1A7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
POLR2J3Q9H1A7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
POLR2J3Q9H1A7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.12■■□□□ 1.13
POLR2J3Q9H1A7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
POLR2J3Q9H1A7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
POLR2J3Q9H1A7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
POLR2J3Q9H1A7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
POLR2J3Q9H1A7 AC096887.2-201ENST00000623443 1957 ntBASIC22.1■■□□□ 1.13
POLR2J3Q9H1A7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
POLR2J3Q9H1A7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
POLR2J3Q9H1A7 AC022211.4-201ENST00000625094 2161 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms