Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LINC00116Q8NCU8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
LINC00116Q8NCU8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LINC00116Q8NCU8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.29■■■□□ 2.6
LINC00116Q8NCU8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
LINC00116Q8NCU8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
LINC00116Q8NCU8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
LINC00116Q8NCU8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
LINC00116Q8NCU8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.28■■■□□ 2.6
LINC00116Q8NCU8 KRT125P-201ENST00000546827 989 ntBASIC31.28■■■□□ 2.6
LINC00116Q8NCU8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.28■■■□□ 2.6
LINC00116Q8NCU8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
LINC00116Q8NCU8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
LINC00116Q8NCU8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
LINC00116Q8NCU8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
LINC00116Q8NCU8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LINC00116Q8NCU8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
LINC00116Q8NCU8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.26■■■□□ 2.59
LINC00116Q8NCU8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.26■■■□□ 2.59
LINC00116Q8NCU8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
LINC00116Q8NCU8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.26■■■□□ 2.59
LINC00116Q8NCU8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
LINC00116Q8NCU8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LINC00116Q8NCU8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.25■■■□□ 2.59
LINC00116Q8NCU8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.25■■■□□ 2.59
LINC00116Q8NCU8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.25■■■□□ 2.59
LINC00116Q8NCU8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.24■■■□□ 2.59
LINC00116Q8NCU8 BX664725.1-201ENST00000438252 379 ntBASIC31.24■■■□□ 2.59
LINC00116Q8NCU8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.24■■■□□ 2.59
LINC00116Q8NCU8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.23■■■□□ 2.59
LINC00116Q8NCU8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LINC00116Q8NCU8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LINC00116Q8NCU8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.23■■■□□ 2.59
LINC00116Q8NCU8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LINC00116Q8NCU8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.22■■■□□ 2.59
LINC00116Q8NCU8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LINC00116Q8NCU8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.21■■■□□ 2.59
LINC00116Q8NCU8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LINC00116Q8NCU8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
LINC00116Q8NCU8 KRT16P3-201ENST00000439127 1283 ntBASIC31.2■■■□□ 2.59
LINC00116Q8NCU8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.2■■■□□ 2.59
LINC00116Q8NCU8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
LINC00116Q8NCU8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
LINC00116Q8NCU8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
LINC00116Q8NCU8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
LINC00116Q8NCU8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LINC00116Q8NCU8 MIR638-201ENST00000385237 100 ntBASIC31.18■■■□□ 2.58
LINC00116Q8NCU8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.18■■■□□ 2.58
LINC00116Q8NCU8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.18■■■□□ 2.58
LINC00116Q8NCU8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.18■■■□□ 2.58
LINC00116Q8NCU8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
LINC00116Q8NCU8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LINC00116Q8NCU8 AC022616.5-201ENST00000518796 181 ntBASIC31.17■■■□□ 2.58
LINC00116Q8NCU8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
LINC00116Q8NCU8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
LINC00116Q8NCU8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.15■■■□□ 2.58
LINC00116Q8NCU8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
LINC00116Q8NCU8 KRT18P24-201ENST00000344739 1156 ntBASIC31.15■■■□□ 2.58
LINC00116Q8NCU8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.15■■■□□ 2.58
LINC00116Q8NCU8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
LINC00116Q8NCU8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
LINC00116Q8NCU8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
LINC00116Q8NCU8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
LINC00116Q8NCU8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
LINC00116Q8NCU8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
LINC00116Q8NCU8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
LINC00116Q8NCU8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
LINC00116Q8NCU8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.12■■■□□ 2.57
LINC00116Q8NCU8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.12■■■□□ 2.57
LINC00116Q8NCU8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.12■■■□□ 2.57
LINC00116Q8NCU8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.12■■■□□ 2.57
LINC00116Q8NCU8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
LINC00116Q8NCU8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
LINC00116Q8NCU8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
LINC00116Q8NCU8 TSPY9P-201ENST00000440215 945 ntBASIC31.11■■■□□ 2.57
LINC00116Q8NCU8 TSPY11P-201ENST00000442607 1045 ntBASIC31.11■■■□□ 2.57
LINC00116Q8NCU8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
LINC00116Q8NCU8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
LINC00116Q8NCU8 AC137630.3-201ENST00000607245 391 ntBASIC31.11■■■□□ 2.57
LINC00116Q8NCU8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
LINC00116Q8NCU8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
LINC00116Q8NCU8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
LINC00116Q8NCU8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
LINC00116Q8NCU8 ABCB10P1-201ENST00000614297 2181 ntBASIC31.1■■■□□ 2.57
LINC00116Q8NCU8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
LINC00116Q8NCU8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.09■■■□□ 2.57
LINC00116Q8NCU8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.09■■■□□ 2.57
LINC00116Q8NCU8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.09■■■□□ 2.57
LINC00116Q8NCU8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.09■■■□□ 2.57
LINC00116Q8NCU8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
LINC00116Q8NCU8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LINC00116Q8NCU8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.08■■■□□ 2.57
LINC00116Q8NCU8 AC021242.3-201ENST00000607598 1377 ntBASIC31.08■■■□□ 2.57
LINC00116Q8NCU8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
LINC00116Q8NCU8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
LINC00116Q8NCU8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
LINC00116Q8NCU8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.08■■■□□ 2.57
LINC00116Q8NCU8 AC120024.1-201ENST00000562672 995 ntBASIC31.07■■■□□ 2.56
LINC00116Q8NCU8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.07■■■□□ 2.56
LINC00116Q8NCU8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms