Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 AP006261.1-201ENST00000584783 668 ntBASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 AC096887.2-201ENST00000623443 1957 ntBASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 AC044849.2-201ENST00000606596 710 ntBASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC71LQ8N9Z2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms