Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC71LQ8N9Z2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC71LQ8N9Z2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 AP006261.1-201ENST00000584783 668 ntBASIC19.96■□□□□ 0.79
CCDC71LQ8N9Z2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC71LQ8N9Z2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC71LQ8N9Z2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC71LQ8N9Z2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC71LQ8N9Z2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 AC096887.2-201ENST00000623443 1957 ntBASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC71LQ8N9Z2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC71LQ8N9Z2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC71LQ8N9Z2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 AC044849.2-201ENST00000606596 710 ntBASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC71LQ8N9Z2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC71LQ8N9Z2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms