Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23■■□□□ 1.27
ARHGEF39Q8N4T4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
ARHGEF39Q8N4T4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ARHGEF39Q8N4T4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
ARHGEF39Q8N4T4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23■■□□□ 1.27
ARHGEF39Q8N4T4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ARHGEF39Q8N4T4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ARHGEF39Q8N4T4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ARHGEF39Q8N4T4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
ARHGEF39Q8N4T4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
ARHGEF39Q8N4T4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.99■■□□□ 1.27
ARHGEF39Q8N4T4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
ARHGEF39Q8N4T4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.99■■□□□ 1.27
ARHGEF39Q8N4T4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARHGEF39Q8N4T4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARHGEF39Q8N4T4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARHGEF39Q8N4T4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ARHGEF39Q8N4T4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
ARHGEF39Q8N4T4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
ARHGEF39Q8N4T4 TSPY13P-201ENST00000338964 914 ntBASIC22.97■■□□□ 1.27
ARHGEF39Q8N4T4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ARHGEF39Q8N4T4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
ARHGEF39Q8N4T4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ARHGEF39Q8N4T4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ARHGEF39Q8N4T4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ARHGEF39Q8N4T4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ARHGEF39Q8N4T4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ARHGEF39Q8N4T4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.96■■□□□ 1.27
ARHGEF39Q8N4T4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
ARHGEF39Q8N4T4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.95■■□□□ 1.26
ARHGEF39Q8N4T4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.95■■□□□ 1.26
ARHGEF39Q8N4T4 AL033527.3-201ENST00000566366 1196 ntBASIC22.95■■□□□ 1.26
ARHGEF39Q8N4T4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
ARHGEF39Q8N4T4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ARHGEF39Q8N4T4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ARHGEF39Q8N4T4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ARHGEF39Q8N4T4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.93■■□□□ 1.26
ARHGEF39Q8N4T4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
ARHGEF39Q8N4T4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ARHGEF39Q8N4T4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
ARHGEF39Q8N4T4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
ARHGEF39Q8N4T4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ARHGEF39Q8N4T4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.92■■□□□ 1.26
ARHGEF39Q8N4T4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 DUX4L18-201ENST00000553347 1267 ntBASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 MIR6765-201ENST00000614092 87 ntBASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ARHGEF39Q8N4T4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ARHGEF39Q8N4T4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ARHGEF39Q8N4T4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.9■■□□□ 1.26
ARHGEF39Q8N4T4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ARHGEF39Q8N4T4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ARHGEF39Q8N4T4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ARHGEF39Q8N4T4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ARHGEF39Q8N4T4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ARHGEF39Q8N4T4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
ARHGEF39Q8N4T4 AC018755.3-202ENST00000596210 929 ntBASIC22.89■■□□□ 1.25
ARHGEF39Q8N4T4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.89■■□□□ 1.25
ARHGEF39Q8N4T4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.89■■□□□ 1.25
ARHGEF39Q8N4T4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ARHGEF39Q8N4T4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ARHGEF39Q8N4T4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ARHGEF39Q8N4T4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ARHGEF39Q8N4T4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.87■■□□□ 1.25
ARHGEF39Q8N4T4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ARHGEF39Q8N4T4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
ARHGEF39Q8N4T4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ARHGEF39Q8N4T4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ARHGEF39Q8N4T4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ARHGEF39Q8N4T4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.86■■□□□ 1.25
ARHGEF39Q8N4T4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ARHGEF39Q8N4T4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms