Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RP1L1Q8IWN7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RP1L1Q8IWN7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RP1L1Q8IWN7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.96■■□□□ 1.11
RP1L1Q8IWN7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.96■■□□□ 1.11
RP1L1Q8IWN7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.96■■□□□ 1.11
RP1L1Q8IWN7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.96■■□□□ 1.11
RP1L1Q8IWN7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RP1L1Q8IWN7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RP1L1Q8IWN7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.95■■□□□ 1.1
RP1L1Q8IWN7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
RP1L1Q8IWN7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RP1L1Q8IWN7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.95■■□□□ 1.1
RP1L1Q8IWN7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RP1L1Q8IWN7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RP1L1Q8IWN7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RP1L1Q8IWN7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RP1L1Q8IWN7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RP1L1Q8IWN7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RP1L1Q8IWN7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RP1L1Q8IWN7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.94■■□□□ 1.1
RP1L1Q8IWN7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RP1L1Q8IWN7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RP1L1Q8IWN7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.93■■□□□ 1.1
RP1L1Q8IWN7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.93■■□□□ 1.1
RP1L1Q8IWN7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RP1L1Q8IWN7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RP1L1Q8IWN7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RP1L1Q8IWN7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.93■■□□□ 1.1
RP1L1Q8IWN7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.93■■□□□ 1.1
RP1L1Q8IWN7 KRT16P3-201ENST00000439127 1283 ntBASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 UNC93B8-201ENST00000511903 705 ntBASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.92■■□□□ 1.1
RP1L1Q8IWN7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RP1L1Q8IWN7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RP1L1Q8IWN7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.9■■□□□ 1.1
RP1L1Q8IWN7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RP1L1Q8IWN7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RP1L1Q8IWN7 LONRF2P2-201ENST00000439212 571 ntBASIC21.9■■□□□ 1.1
RP1L1Q8IWN7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.9■■□□□ 1.1
RP1L1Q8IWN7 AC110285.6-201ENST00000617652 491 ntBASIC21.9■■□□□ 1.1
RP1L1Q8IWN7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.9■■□□□ 1.1
RP1L1Q8IWN7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RP1L1Q8IWN7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
RP1L1Q8IWN7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
RP1L1Q8IWN7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RP1L1Q8IWN7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RP1L1Q8IWN7 AL359504.2-201ENST00000605506 1601 ntBASIC21.89■■□□□ 1.09
RP1L1Q8IWN7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
RP1L1Q8IWN7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RP1L1Q8IWN7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RP1L1Q8IWN7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RP1L1Q8IWN7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RP1L1Q8IWN7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RP1L1Q8IWN7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RP1L1Q8IWN7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
RP1L1Q8IWN7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.88■■□□□ 1.09
RP1L1Q8IWN7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RP1L1Q8IWN7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RP1L1Q8IWN7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RP1L1Q8IWN7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.87■■□□□ 1.09
RP1L1Q8IWN7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RP1L1Q8IWN7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
RP1L1Q8IWN7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.86■■□□□ 1.09
RP1L1Q8IWN7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.86■■□□□ 1.09
RP1L1Q8IWN7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.86■■□□□ 1.09
RP1L1Q8IWN7 MIR3621-201ENST00000580529 85 ntBASIC21.86■■□□□ 1.09
RP1L1Q8IWN7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.86■■□□□ 1.09
RP1L1Q8IWN7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RP1L1Q8IWN7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RP1L1Q8IWN7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RP1L1Q8IWN7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RP1L1Q8IWN7 KRT18P24-201ENST00000344739 1156 ntBASIC21.85■■□□□ 1.09
RP1L1Q8IWN7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms