Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NHLRC1Q6VVB1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NHLRC1Q6VVB1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NHLRC1Q6VVB1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NHLRC1Q6VVB1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NHLRC1Q6VVB1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.68■■□□□ 1.06
NHLRC1Q6VVB1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.68■■□□□ 1.06
NHLRC1Q6VVB1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NHLRC1Q6VVB1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NHLRC1Q6VVB1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NHLRC1Q6VVB1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NHLRC1Q6VVB1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NHLRC1Q6VVB1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NHLRC1Q6VVB1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NHLRC1Q6VVB1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.67■■□□□ 1.06
NHLRC1Q6VVB1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.67■■□□□ 1.06
NHLRC1Q6VVB1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NHLRC1Q6VVB1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NHLRC1Q6VVB1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NHLRC1Q6VVB1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.66■■□□□ 1.06
NHLRC1Q6VVB1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.66■■□□□ 1.06
NHLRC1Q6VVB1 SMPD5-203ENST00000639008 1464 ntBASIC21.66■■□□□ 1.06
NHLRC1Q6VVB1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NHLRC1Q6VVB1 GPX1-201ENST00000419349 1106 ntBASIC21.66■■□□□ 1.06
NHLRC1Q6VVB1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NHLRC1Q6VVB1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NHLRC1Q6VVB1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NHLRC1Q6VVB1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NHLRC1Q6VVB1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.65■■□□□ 1.06
NHLRC1Q6VVB1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NHLRC1Q6VVB1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.65■■□□□ 1.06
NHLRC1Q6VVB1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NHLRC1Q6VVB1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NHLRC1Q6VVB1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.65■■□□□ 1.06
NHLRC1Q6VVB1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NHLRC1Q6VVB1 ERN1-208ENST00000606895 2068 ntBASIC21.65■■□□□ 1.06
NHLRC1Q6VVB1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NHLRC1Q6VVB1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NHLRC1Q6VVB1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NHLRC1Q6VVB1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NHLRC1Q6VVB1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NHLRC1Q6VVB1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NHLRC1Q6VVB1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NHLRC1Q6VVB1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NHLRC1Q6VVB1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NHLRC1Q6VVB1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.63■■□□□ 1.05
NHLRC1Q6VVB1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.63■■□□□ 1.05
NHLRC1Q6VVB1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NHLRC1Q6VVB1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NHLRC1Q6VVB1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.62■■□□□ 1.05
NHLRC1Q6VVB1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NHLRC1Q6VVB1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
NHLRC1Q6VVB1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
NHLRC1Q6VVB1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
NHLRC1Q6VVB1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.62■■□□□ 1.05
NHLRC1Q6VVB1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.62■■□□□ 1.05
NHLRC1Q6VVB1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.61■■□□□ 1.05
NHLRC1Q6VVB1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.61■■□□□ 1.05
NHLRC1Q6VVB1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.61■■□□□ 1.05
NHLRC1Q6VVB1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NHLRC1Q6VVB1 AC010501.1-201ENST00000606270 1962 ntBASIC21.61■■□□□ 1.05
NHLRC1Q6VVB1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NHLRC1Q6VVB1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.61■■□□□ 1.05
NHLRC1Q6VVB1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NHLRC1Q6VVB1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NHLRC1Q6VVB1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NHLRC1Q6VVB1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.6■■□□□ 1.05
NHLRC1Q6VVB1 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.6■■□□□ 1.05
NHLRC1Q6VVB1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NHLRC1Q6VVB1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NHLRC1Q6VVB1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
NHLRC1Q6VVB1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NHLRC1Q6VVB1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NHLRC1Q6VVB1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.58■■□□□ 1.05
NHLRC1Q6VVB1 MIR3960-201ENST00000583311 91 ntBASIC21.58■■□□□ 1.05
NHLRC1Q6VVB1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NHLRC1Q6VVB1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NHLRC1Q6VVB1 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms