Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ZNF880Q6PDB4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF880Q6PDB4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF880Q6PDB4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF880Q6PDB4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.17■□□□□ 0.82
ZNF880Q6PDB4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF880Q6PDB4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF880Q6PDB4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF880Q6PDB4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.15■□□□□ 0.82
ZNF880Q6PDB4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF880Q6PDB4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF880Q6PDB4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
ZNF880Q6PDB4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.14■□□□□ 0.81
ZNF880Q6PDB4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF880Q6PDB4 AC142381.3-201ENST00000568208 1670 ntBASIC20.13■□□□□ 0.81
ZNF880Q6PDB4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNF880Q6PDB4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.13■□□□□ 0.81
ZNF880Q6PDB4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF880Q6PDB4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF880Q6PDB4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 ABHD17AP4-201ENST00000411545 909 ntBASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 MIR3648-2-201ENST00000581792 180 ntBASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 MIR3648-1-201ENST00000615959 180 ntBASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.12■□□□□ 0.81
ZNF880Q6PDB4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ZNF880Q6PDB4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
ZNF880Q6PDB4 AC126177.7-201ENST00000547904 679 ntBASIC20.11■□□□□ 0.81
ZNF880Q6PDB4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ZNF880Q6PDB4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF880Q6PDB4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF880Q6PDB4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF880Q6PDB4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF880Q6PDB4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF880Q6PDB4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
ZNF880Q6PDB4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF880Q6PDB4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.1■□□□□ 0.81
ZNF880Q6PDB4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF880Q6PDB4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF880Q6PDB4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF880Q6PDB4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF880Q6PDB4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF880Q6PDB4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF880Q6PDB4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF880Q6PDB4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ZNF880Q6PDB4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF880Q6PDB4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.08■□□□□ 0.8
ZNF880Q6PDB4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF880Q6PDB4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF880Q6PDB4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
ZNF880Q6PDB4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF880Q6PDB4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF880Q6PDB4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF880Q6PDB4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF880Q6PDB4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.07■□□□□ 0.8
ZNF880Q6PDB4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF880Q6PDB4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF880Q6PDB4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF880Q6PDB4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZNF880Q6PDB4 AC022211.4-201ENST00000625094 2161 ntBASIC20.06■□□□□ 0.8
ZNF880Q6PDB4 AC093323.1-202ENST00000635031 2045 ntBASIC20.06■□□□□ 0.8
ZNF880Q6PDB4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF880Q6PDB4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ZNF880Q6PDB4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF880Q6PDB4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF880Q6PDB4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF880Q6PDB4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms