Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
LIN54Q6MZP7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LIN54Q6MZP7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LIN54Q6MZP7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LIN54Q6MZP7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LIN54Q6MZP7 AC142381.3-201ENST00000568208 1670 ntBASIC20.51■□□□□ 0.87
LIN54Q6MZP7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.51■□□□□ 0.87
LIN54Q6MZP7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LIN54Q6MZP7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LIN54Q6MZP7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIN54Q6MZP7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIN54Q6MZP7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LIN54Q6MZP7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LIN54Q6MZP7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.5■□□□□ 0.87
LIN54Q6MZP7 AC021231.2-201ENST00000594613 730 ntBASIC20.5■□□□□ 0.87
LIN54Q6MZP7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LIN54Q6MZP7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.49■□□□□ 0.87
LIN54Q6MZP7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LIN54Q6MZP7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIN54Q6MZP7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIN54Q6MZP7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LIN54Q6MZP7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LIN54Q6MZP7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LIN54Q6MZP7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LIN54Q6MZP7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LIN54Q6MZP7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIN54Q6MZP7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LIN54Q6MZP7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIN54Q6MZP7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIN54Q6MZP7 LINC00273-201ENST00000539813 1452 ntBASIC20.48■□□□□ 0.87
LIN54Q6MZP7 PKD1P6-201ENST00000343738 4769 ntBASIC20.48■□□□□ 0.87
LIN54Q6MZP7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LIN54Q6MZP7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LIN54Q6MZP7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIN54Q6MZP7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIN54Q6MZP7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIN54Q6MZP7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIN54Q6MZP7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LIN54Q6MZP7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.47■□□□□ 0.87
LIN54Q6MZP7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.46■□□□□ 0.87
LIN54Q6MZP7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.45■□□□□ 0.86
LIN54Q6MZP7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIN54Q6MZP7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIN54Q6MZP7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LIN54Q6MZP7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.44■□□□□ 0.86
LIN54Q6MZP7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LIN54Q6MZP7 AC012676.1-201ENST00000574705 1949 ntBASIC20.44■□□□□ 0.86
LIN54Q6MZP7 AC135983.2-203ENST00000454486 1613 ntBASIC20.44■□□□□ 0.86
LIN54Q6MZP7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIN54Q6MZP7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.44■□□□□ 0.86
LIN54Q6MZP7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LIN54Q6MZP7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
LIN54Q6MZP7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LIN54Q6MZP7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.43■□□□□ 0.86
LIN54Q6MZP7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.43■□□□□ 0.86
LIN54Q6MZP7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LIN54Q6MZP7 LINC00543-201ENST00000567234 1845 ntBASIC20.43■□□□□ 0.86
LIN54Q6MZP7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.43■□□□□ 0.86
LIN54Q6MZP7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LIN54Q6MZP7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIN54Q6MZP7 AC133561.1-201ENST00000568600 2415 ntBASIC20.42■□□□□ 0.86
LIN54Q6MZP7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.42■□□□□ 0.86
LIN54Q6MZP7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIN54Q6MZP7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIN54Q6MZP7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
LIN54Q6MZP7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LIN54Q6MZP7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LIN54Q6MZP7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LIN54Q6MZP7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LIN54Q6MZP7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LIN54Q6MZP7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms