Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRFAM7AQ494W8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRFAM7AQ494W8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.91■□□□□ 0.94
CHRFAM7AQ494W8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRFAM7AQ494W8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRFAM7AQ494W8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
CHRFAM7AQ494W8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRFAM7AQ494W8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 AC092803.2-201ENST00000564287 1899 ntBASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHRFAM7AQ494W8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 ECEL1P2-201ENST00000461596 1295 ntBASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 AC092296.2-201ENST00000589470 999 ntBASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.88■□□□□ 0.93
CHRFAM7AQ494W8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 AP004609.3-201ENST00000610705 1884 ntBASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 AC110285.7-201ENST00000624417 1536 ntBASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 DUSP8P4-201ENST00000399538 1761 ntBASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRFAM7AQ494W8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRFAM7AQ494W8 AC126177.7-201ENST00000547904 679 ntBASIC20.86■□□□□ 0.93
CHRFAM7AQ494W8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHRFAM7AQ494W8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRFAM7AQ494W8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHRFAM7AQ494W8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRFAM7AQ494W8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHRFAM7AQ494W8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHRFAM7AQ494W8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHRFAM7AQ494W8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHRFAM7AQ494W8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CHRFAM7AQ494W8 MIR219A2-201ENST00000608502 1504 ntBASIC20.83■□□□□ 0.92
CHRFAM7AQ494W8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHRFAM7AQ494W8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 AL035685.1-201ENST00000636663 812 ntBASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.81■□□□□ 0.92
CHRFAM7AQ494W8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.8■□□□□ 0.92
CHRFAM7AQ494W8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms