Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNB3Q15768 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
EFNB3Q15768 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
EFNB3Q15768 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.7■□□□□ 0.9
EFNB3Q15768 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
EFNB3Q15768 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
EFNB3Q15768 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EFNB3Q15768 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNB3Q15768 KRT18P10-201ENST00000388836 1287 ntBASIC20.69■□□□□ 0.9
EFNB3Q15768 RARRES2P1-201ENST00000474487 481 ntBASIC20.69■□□□□ 0.9
EFNB3Q15768 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFNB3Q15768 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNB3Q15768 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.69■□□□□ 0.9
EFNB3Q15768 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNB3Q15768 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNB3Q15768 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.68■□□□□ 0.9
EFNB3Q15768 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
EFNB3Q15768 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EFNB3Q15768 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNB3Q15768 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFNB3Q15768 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.67■□□□□ 0.9
EFNB3Q15768 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFNB3Q15768 AC010980.1-201ENST00000587192 1142 ntBASIC20.67■□□□□ 0.9
EFNB3Q15768 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.67■□□□□ 0.9
EFNB3Q15768 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFNB3Q15768 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
EFNB3Q15768 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFNB3Q15768 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFNB3Q15768 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFNB3Q15768 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.66■□□□□ 0.9
EFNB3Q15768 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.66■□□□□ 0.9
EFNB3Q15768 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
EFNB3Q15768 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFNB3Q15768 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
EFNB3Q15768 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.65■□□□□ 0.9
EFNB3Q15768 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 AC087393.1-201ENST00000582896 145 ntBASIC20.65■□□□□ 0.9
EFNB3Q15768 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFNB3Q15768 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EFNB3Q15768 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.64■□□□□ 0.89
EFNB3Q15768 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.64■□□□□ 0.89
EFNB3Q15768 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.63■□□□□ 0.89
EFNB3Q15768 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
EFNB3Q15768 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFNB3Q15768 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFNB3Q15768 RPS2P7-201ENST00000447334 885 ntBASIC20.63■□□□□ 0.89
EFNB3Q15768 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.63■□□□□ 0.89
EFNB3Q15768 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFNB3Q15768 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
EFNB3Q15768 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFNB3Q15768 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.62■□□□□ 0.89
EFNB3Q15768 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.62■□□□□ 0.89
EFNB3Q15768 AC019171.1-201ENST00000601251 1056 ntBASIC20.62■□□□□ 0.89
EFNB3Q15768 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFNB3Q15768 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFNB3Q15768 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.62■□□□□ 0.89
EFNB3Q15768 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFNB3Q15768 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFNB3Q15768 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EFNB3Q15768 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EFNB3Q15768 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.61■□□□□ 0.89
EFNB3Q15768 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EFNB3Q15768 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EFNB3Q15768 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
EFNB3Q15768 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EFNB3Q15768 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EFNB3Q15768 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB3Q15768 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB3Q15768 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB3Q15768 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB3Q15768 PVT1_1.1-201ENST00000615125 194 ntBASIC20.59■□□□□ 0.89
EFNB3Q15768 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
EFNB3Q15768 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EFNB3Q15768 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.59■□□□□ 0.89
EFNB3Q15768 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EFNB3Q15768 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
EFNB3Q15768 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EFNB3Q15768 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EFNB3Q15768 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.58■□□□□ 0.89
EFNB3Q15768 MIR4508-201ENST00000584178 70 ntBASIC20.58■□□□□ 0.89
EFNB3Q15768 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.58■□□□□ 0.89
EFNB3Q15768 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB3Q15768 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB3Q15768 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB3Q15768 YBX1P4-201ENST00000392794 808 ntBASIC20.57■□□□□ 0.88
EFNB3Q15768 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB3Q15768 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EFNB3Q15768 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.57■□□□□ 0.88
EFNB3Q15768 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB3Q15768 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EFNB3Q15768 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 270.1 ms