Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
APOC4P55056 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.76■□□□□ 0.43
APOC4P55056 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.76■□□□□ 0.43
APOC4P55056 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
APOC4P55056 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
APOC4P55056 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
APOC4P55056 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOC4P55056 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOC4P55056 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOC4P55056 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
APOC4P55056 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
APOC4P55056 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOC4P55056 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOC4P55056 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
APOC4P55056 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APOC4P55056 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APOC4P55056 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APOC4P55056 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
APOC4P55056 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOC4P55056 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOC4P55056 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
APOC4P55056 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.73■□□□□ 0.43
APOC4P55056 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.73■□□□□ 0.43
APOC4P55056 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
APOC4P55056 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
APOC4P55056 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
APOC4P55056 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOC4P55056 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APOC4P55056 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOC4P55056 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.71■□□□□ 0.43
APOC4P55056 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOC4P55056 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOC4P55056 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.71■□□□□ 0.43
APOC4P55056 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOC4P55056 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOC4P55056 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.71■□□□□ 0.43
APOC4P55056 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
APOC4P55056 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APOC4P55056 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
APOC4P55056 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOC4P55056 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOC4P55056 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOC4P55056 YBX1P4-201ENST00000392794 808 ntBASIC17.7■□□□□ 0.42
APOC4P55056 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APOC4P55056 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.7■□□□□ 0.42
APOC4P55056 AC010980.1-201ENST00000587192 1142 ntBASIC17.7■□□□□ 0.42
APOC4P55056 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APOC4P55056 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
APOC4P55056 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.69■□□□□ 0.42
APOC4P55056 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.69■□□□□ 0.42
APOC4P55056 RARRES2P1-201ENST00000474487 481 ntBASIC17.69■□□□□ 0.42
APOC4P55056 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.69■□□□□ 0.42
APOC4P55056 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APOC4P55056 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
APOC4P55056 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC17.69■□□□□ 0.42
APOC4P55056 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC4P55056 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC4P55056 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.68■□□□□ 0.42
APOC4P55056 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
APOC4P55056 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOC4P55056 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOC4P55056 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.68■□□□□ 0.42
APOC4P55056 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APOC4P55056 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOC4P55056 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.67■□□□□ 0.42
APOC4P55056 RPS2P7-201ENST00000447334 885 ntBASIC17.67■□□□□ 0.42
APOC4P55056 AC087393.1-201ENST00000582896 145 ntBASIC17.67■□□□□ 0.42
APOC4P55056 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC4P55056 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
APOC4P55056 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.66■□□□□ 0.42
APOC4P55056 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
APOC4P55056 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
APOC4P55056 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
APOC4P55056 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC4P55056 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOC4P55056 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOC4P55056 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC4P55056 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC4P55056 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOC4P55056 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOC4P55056 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC4P55056 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC4P55056 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC4P55056 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOC4P55056 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
APOC4P55056 AC019171.1-201ENST00000601251 1056 ntBASIC17.64■□□□□ 0.41
APOC4P55056 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC4P55056 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.64■□□□□ 0.41
APOC4P55056 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOC4P55056 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.64■□□□□ 0.41
APOC4P55056 KRT8P33-201ENST00000508125 1423 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms