Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1P51610 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1P51610 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HCFC1P51610 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.35■■□□□ 1.01
HCFC1P51610 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.35■■□□□ 1.01
HCFC1P51610 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HCFC1P51610 AL356441.2-201ENST00000443009 864 ntBASIC21.34■■□□□ 1.01
HCFC1P51610 AC239859.2-201ENST00000444165 318 ntBASIC21.34■■□□□ 1.01
HCFC1P51610 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.34■■□□□ 1.01
HCFC1P51610 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HCFC1P51610 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1P51610 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1P51610 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.34■■□□□ 1.01
HCFC1P51610 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.34■■□□□ 1.01
HCFC1P51610 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HCFC1P51610 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HCFC1P51610 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.33■■□□□ 1
HCFC1P51610 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.33■■□□□ 1
HCFC1P51610 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
HCFC1P51610 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.33■■□□□ 1
HCFC1P51610 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
HCFC1P51610 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1P51610 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1P51610 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1P51610 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1P51610 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC1P51610 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
HCFC1P51610 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1P51610 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1P51610 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.3■■□□□ 1
HCFC1P51610 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1P51610 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HCFC1P51610 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.3■■□□□ 1
HCFC1P51610 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.3■■□□□ 1
HCFC1P51610 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.3■■□□□ 1
HCFC1P51610 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HCFC1P51610 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC1P51610 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.29■■□□□ 1
HCFC1P51610 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.29■■□□□ 1
HCFC1P51610 RPS2P7-201ENST00000447334 885 ntBASIC21.29■■□□□ 1
HCFC1P51610 AC022616.5-201ENST00000518796 181 ntBASIC21.29■■□□□ 1
HCFC1P51610 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.29■■□□□ 1
HCFC1P51610 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC1P51610 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.29■■□□□ 1
HCFC1P51610 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HCFC1P51610 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1P51610 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC1P51610 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HCFC1P51610 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.28■■□□□ 1
HCFC1P51610 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.28■■□□□ 1
HCFC1P51610 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.28■■□□□ 1
HCFC1P51610 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.28■■□□□ 1
HCFC1P51610 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.28■■□□□ 1
HCFC1P51610 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
HCFC1P51610 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.27■■□□□ 1
HCFC1P51610 BX664725.1-201ENST00000438252 379 ntBASIC21.27■■□□□ 1
HCFC1P51610 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.27■■□□□ 1
HCFC1P51610 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HCFC1P51610 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HCFC1P51610 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1P51610 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HCFC1P51610 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.26■□□□□ 0.99
HCFC1P51610 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1P51610 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1P51610 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1P51610 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HCFC1P51610 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.26■□□□□ 0.99
HCFC1P51610 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HCFC1P51610 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.25■□□□□ 0.99
HCFC1P51610 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1P51610 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.24■□□□□ 0.99
HCFC1P51610 MIR4787-201ENST00000607364 84 ntBASIC21.24■□□□□ 0.99
HCFC1P51610 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HCFC1P51610 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1P51610 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1P51610 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1P51610 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.24■□□□□ 0.99
HCFC1P51610 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.24■□□□□ 0.99
HCFC1P51610 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1P51610 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HCFC1P51610 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1P51610 KRT16P3-201ENST00000439127 1283 ntBASIC21.23■□□□□ 0.99
HCFC1P51610 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
HCFC1P51610 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.23■□□□□ 0.99
HCFC1P51610 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1P51610 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HCFC1P51610 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
HCFC1P51610 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1P51610 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1P51610 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1P51610 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HCFC1P51610 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.22■□□□□ 0.99
HCFC1P51610 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.22■□□□□ 0.99
HCFC1P51610 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HCFC1P51610 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HCFC1P51610 UNC93B8-201ENST00000511903 705 ntBASIC21.21■□□□□ 0.99
HCFC1P51610 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC1P51610 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HCFC1P51610 KRT125P-201ENST00000546827 989 ntBASIC21.2■□□□□ 0.98
HCFC1P51610 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms