Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC15.2■□□□□ 0.02
UBE2AP49459 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2AP49459 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2AP49459 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2AP49459 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
UBE2AP49459 CHST11-203ENST00000547956 936 ntTSL 2 BASIC15.2■□□□□ 0.02
UBE2AP49459 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2AP49459 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2AP49459 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
UBE2AP49459 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC15.19■□□□□ 0.02
UBE2AP49459 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC15.19■□□□□ 0.02
UBE2AP49459 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
UBE2AP49459 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBE2AP49459 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC15.19■□□□□ 0.02
UBE2AP49459 AC126177.7-201ENST00000547904 679 ntBASIC15.19■□□□□ 0.02
UBE2AP49459 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBE2AP49459 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBE2AP49459 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC15.19■□□□□ 0.02
UBE2AP49459 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBE2AP49459 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBE2AP49459 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
UBE2AP49459 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UBE2AP49459 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
UBE2AP49459 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UBE2AP49459 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UBE2AP49459 CR559946.2-201ENST00000623684 991 ntBASIC15.18■□□□□ 0.02
UBE2AP49459 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.18■□□□□ 0.02
UBE2AP49459 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UBE2AP49459 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBE2AP49459 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBE2AP49459 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBE2AP49459 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBE2AP49459 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC15.17■□□□□ 0.02
UBE2AP49459 HLA-V-202ENST00000446817 847 ntBASIC15.17■□□□□ 0.02
UBE2AP49459 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBE2AP49459 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
UBE2AP49459 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
UBE2AP49459 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBE2AP49459 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBE2AP49459 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBE2AP49459 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBE2AP49459 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC15.16■□□□□ 0.02
UBE2AP49459 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.16■□□□□ 0.02
UBE2AP49459 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBE2AP49459 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
UBE2AP49459 AL359258.2-201ENST00000564063 1566 ntBASIC15.15■□□□□ 0.02
UBE2AP49459 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC15.15■□□□□ 0.02
UBE2AP49459 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBE2AP49459 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBE2AP49459 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBE2AP49459 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC15.15■□□□□ 0.02
UBE2AP49459 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBE2AP49459 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBE2AP49459 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBE2AP49459 MIR3648-2-201ENST00000581792 180 ntBASIC15.15■□□□□ 0.02
UBE2AP49459 MIR7108-201ENST00000614319 87 ntBASIC15.15■□□□□ 0.02
UBE2AP49459 MIR3648-1-201ENST00000615959 180 ntBASIC15.15■□□□□ 0.02
UBE2AP49459 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
UBE2AP49459 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBE2AP49459 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
UBE2AP49459 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2AP49459 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2AP49459 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.14■□□□□ 0.01
UBE2AP49459 AC016575.1-201ENST00000607026 382 ntBASIC15.14■□□□□ 0.01
UBE2AP49459 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.14■□□□□ 0.01
UBE2AP49459 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC15.14■□□□□ 0.01
UBE2AP49459 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UBE2AP49459 AC091060.1-201ENST00000623524 1766 ntBASIC15.13■□□□□ 0.01
UBE2AP49459 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2AP49459 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UBE2AP49459 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
UBE2AP49459 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2AP49459 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
UBE2AP49459 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2AP49459 AC145676.1-201ENST00000514988 2004 ntBASIC15.13■□□□□ 0.01
UBE2AP49459 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UBE2AP49459 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC15.13■□□□□ 0.01
UBE2AP49459 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
UBE2AP49459 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UBE2AP49459 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
UBE2AP49459 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2AP49459 AC092803.2-201ENST00000564287 1899 ntBASIC15.12■□□□□ 0.01
UBE2AP49459 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC15.12■□□□□ 0.01
UBE2AP49459 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2AP49459 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2AP49459 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
UBE2AP49459 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.12■□□□□ 0.01
UBE2AP49459 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2AP49459 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC15.11■□□□□ 0.01
UBE2AP49459 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2AP49459 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms