Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
GDF1P27539 AC139795.1-202ENST00000500444 432 ntBASIC22.01■■□□□ 1.11
GDF1P27539 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.01■■□□□ 1.11
GDF1P27539 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
GDF1P27539 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
GDF1P27539 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
GDF1P27539 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GDF1P27539 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
GDF1P27539 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22■■□□□ 1.11
GDF1P27539 HYI-210ENST00000486909 905 ntTSL 5 BASIC22■■□□□ 1.11
GDF1P27539 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GDF1P27539 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GDF1P27539 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
GDF1P27539 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GDF1P27539 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GDF1P27539 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GDF1P27539 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.99■■□□□ 1.11
GDF1P27539 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.98■■□□□ 1.11
GDF1P27539 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.97■■□□□ 1.11
GDF1P27539 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GDF1P27539 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GDF1P27539 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.97■■□□□ 1.11
GDF1P27539 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
GDF1P27539 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.96■■□□□ 1.11
GDF1P27539 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
GDF1P27539 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF1P27539 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF1P27539 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF1P27539 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF1P27539 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GDF1P27539 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
GDF1P27539 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.95■■□□□ 1.1
GDF1P27539 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.95■■□□□ 1.1
GDF1P27539 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.95■■□□□ 1.1
GDF1P27539 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
GDF1P27539 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDF1P27539 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
GDF1P27539 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GDF1P27539 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDF1P27539 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDF1P27539 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GDF1P27539 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.94■■□□□ 1.1
GDF1P27539 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF1P27539 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF1P27539 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF1P27539 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF1P27539 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.94■■□□□ 1.1
GDF1P27539 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GDF1P27539 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GDF1P27539 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GDF1P27539 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GDF1P27539 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
GDF1P27539 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
GDF1P27539 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF1P27539 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.92■■□□□ 1.1
GDF1P27539 AC010980.1-201ENST00000587192 1142 ntBASIC21.92■■□□□ 1.1
GDF1P27539 AC074183.2-201ENST00000623112 922 ntBASIC21.92■■□□□ 1.1
GDF1P27539 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF1P27539 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF1P27539 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF1P27539 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GDF1P27539 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF1P27539 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
GDF1P27539 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF1P27539 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
GDF1P27539 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF1P27539 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
GDF1P27539 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF1P27539 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDF1P27539 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDF1P27539 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.9■■□□□ 1.1
GDF1P27539 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GDF1P27539 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
GDF1P27539 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
GDF1P27539 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.89■■□□□ 1.09
GDF1P27539 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GDF1P27539 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.89■■□□□ 1.09
GDF1P27539 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GDF1P27539 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GDF1P27539 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.88■■□□□ 1.09
GDF1P27539 RARRES2P1-201ENST00000474487 481 ntBASIC21.88■■□□□ 1.09
GDF1P27539 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GDF1P27539 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
GDF1P27539 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GDF1P27539 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.87■■□□□ 1.09
GDF1P27539 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
GDF1P27539 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GDF1P27539 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.87■■□□□ 1.09
GDF1P27539 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GDF1P27539 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
GDF1P27539 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
GDF1P27539 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
GDF1P27539 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.86■■□□□ 1.09
GDF1P27539 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.86■■□□□ 1.09
GDF1P27539 KRT18P10-201ENST00000388836 1287 ntBASIC21.86■■□□□ 1.09
GDF1P27539 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.86■■□□□ 1.09
GDF1P27539 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
GDF1P27539 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
GDF1P27539 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.86■■□□□ 1.09
GDF1P27539 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms