Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP1R3DO95685 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PPP1R3DO95685 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.8■■□□□ 1.08
PPP1R3DO95685 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.79■■□□□ 1.08
PPP1R3DO95685 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
PPP1R3DO95685 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP1R3DO95685 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP1R3DO95685 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP1R3DO95685 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.79■■□□□ 1.08
PPP1R3DO95685 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PPP1R3DO95685 AC096887.2-201ENST00000623443 1957 ntBASIC21.79■■□□□ 1.08
PPP1R3DO95685 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP1R3DO95685 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PPP1R3DO95685 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
PPP1R3DO95685 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PPP1R3DO95685 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.78■■□□□ 1.08
PPP1R3DO95685 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP1R3DO95685 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP1R3DO95685 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP1R3DO95685 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PPP1R3DO95685 ABHD17AP4-201ENST00000411545 909 ntBASIC21.77■■□□□ 1.08
PPP1R3DO95685 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PPP1R3DO95685 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.77■■□□□ 1.08
PPP1R3DO95685 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.77■■□□□ 1.08
PPP1R3DO95685 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PPP1R3DO95685 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PPP1R3DO95685 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP1R3DO95685 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP1R3DO95685 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PPP1R3DO95685 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.74■■□□□ 1.07
PPP1R3DO95685 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP1R3DO95685 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
PPP1R3DO95685 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PPP1R3DO95685 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.74■■□□□ 1.07
PPP1R3DO95685 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PPP1R3DO95685 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP1R3DO95685 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP1R3DO95685 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
PPP1R3DO95685 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PPP1R3DO95685 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP1R3DO95685 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PPP1R3DO95685 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.73■■□□□ 1.07
PPP1R3DO95685 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
PPP1R3DO95685 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPP1R3DO95685 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP1R3DO95685 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPP1R3DO95685 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PPP1R3DO95685 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPP1R3DO95685 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPP1R3DO95685 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.72■■□□□ 1.07
PPP1R3DO95685 MIR3648-2-201ENST00000581792 180 ntBASIC21.72■■□□□ 1.07
PPP1R3DO95685 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.72■■□□□ 1.07
PPP1R3DO95685 MIR3648-1-201ENST00000615959 180 ntBASIC21.72■■□□□ 1.07
PPP1R3DO95685 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPP1R3DO95685 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP1R3DO95685 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PPP1R3DO95685 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PPP1R3DO95685 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PPP1R3DO95685 AC142381.3-201ENST00000568208 1670 ntBASIC21.71■■□□□ 1.07
PPP1R3DO95685 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.71■■□□□ 1.07
PPP1R3DO95685 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PPP1R3DO95685 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
PPP1R3DO95685 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.7■■□□□ 1.06
PPP1R3DO95685 AC093323.1-202ENST00000635031 2045 ntBASIC21.7■■□□□ 1.06
PPP1R3DO95685 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.7■■□□□ 1.06
PPP1R3DO95685 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPP1R3DO95685 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPP1R3DO95685 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PPP1R3DO95685 AC126177.7-201ENST00000547904 679 ntBASIC21.7■■□□□ 1.06
PPP1R3DO95685 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PPP1R3DO95685 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP1R3DO95685 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PPP1R3DO95685 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP1R3DO95685 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.69■■□□□ 1.06
PPP1R3DO95685 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.69■■□□□ 1.06
PPP1R3DO95685 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPP1R3DO95685 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPP1R3DO95685 AC022211.4-201ENST00000625094 2161 ntBASIC21.68■■□□□ 1.06
PPP1R3DO95685 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP1R3DO95685 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP1R3DO95685 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.68■■□□□ 1.06
PPP1R3DO95685 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP1R3DO95685 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP1R3DO95685 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP1R3DO95685 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PPP1R3DO95685 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PPP1R3DO95685 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP1R3DO95685 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.67■■□□□ 1.06
PPP1R3DO95685 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP1R3DO95685 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP1R3DO95685 AC016575.1-201ENST00000607026 382 ntBASIC21.67■■□□□ 1.06
PPP1R3DO95685 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP1R3DO95685 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPP1R3DO95685 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PPP1R3DO95685 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP1R3DO95685 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP1R3DO95685 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPP1R3DO95685 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP1R3DO95685 AC138932.3-201ENST00000567634 1902 ntBASIC21.65■■□□□ 1.06
PPP1R3DO95685 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms