Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SNRNP200O75643 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
SNRNP200O75643 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.35■■□□□ 1.33
SNRNP200O75643 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.35■■□□□ 1.33
SNRNP200O75643 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SNRNP200O75643 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SNRNP200O75643 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNRNP200O75643 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNRNP200O75643 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SNRNP200O75643 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
SNRNP200O75643 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SNRNP200O75643 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SNRNP200O75643 ERN1-208ENST00000606895 2068 ntBASIC23.33■■□□□ 1.33
SNRNP200O75643 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SNRNP200O75643 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SNRNP200O75643 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
SNRNP200O75643 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SNRNP200O75643 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.33■■□□□ 1.32
SNRNP200O75643 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SNRNP200O75643 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SNRNP200O75643 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SNRNP200O75643 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNRNP200O75643 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SNRNP200O75643 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.32■■□□□ 1.32
SNRNP200O75643 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.32■■□□□ 1.32
SNRNP200O75643 AL033527.3-201ENST00000566366 1196 ntBASIC23.32■■□□□ 1.32
SNRNP200O75643 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.31■■□□□ 1.32
SNRNP200O75643 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.31■■□□□ 1.32
SNRNP200O75643 TSPY13P-201ENST00000338964 914 ntBASIC23.31■■□□□ 1.32
SNRNP200O75643 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
SNRNP200O75643 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SNRNP200O75643 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SNRNP200O75643 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
SNRNP200O75643 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SNRNP200O75643 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SNRNP200O75643 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SNRNP200O75643 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.3■■□□□ 1.32
SNRNP200O75643 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SNRNP200O75643 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SNRNP200O75643 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNRNP200O75643 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SNRNP200O75643 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNRNP200O75643 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.29■■□□□ 1.32
SNRNP200O75643 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SNRNP200O75643 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SNRNP200O75643 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNRNP200O75643 AC004987.1-201ENST00000428627 508 ntBASIC23.28■■□□□ 1.32
SNRNP200O75643 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNRNP200O75643 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
SNRNP200O75643 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SNRNP200O75643 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SNRNP200O75643 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SNRNP200O75643 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SNRNP200O75643 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SNRNP200O75643 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SNRNP200O75643 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.27■■□□□ 1.32
SNRNP200O75643 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.27■■□□□ 1.32
SNRNP200O75643 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
SNRNP200O75643 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.26■■□□□ 1.31
SNRNP200O75643 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SNRNP200O75643 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SNRNP200O75643 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SNRNP200O75643 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SNRNP200O75643 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SNRNP200O75643 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.26■■□□□ 1.31
SNRNP200O75643 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SNRNP200O75643 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SNRNP200O75643 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNRNP200O75643 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.25■■□□□ 1.31
SNRNP200O75643 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.25■■□□□ 1.31
SNRNP200O75643 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNRNP200O75643 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SNRNP200O75643 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.25■■□□□ 1.31
SNRNP200O75643 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SNRNP200O75643 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNRNP200O75643 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.24■■□□□ 1.31
SNRNP200O75643 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNRNP200O75643 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNRNP200O75643 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNRNP200O75643 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.23■■□□□ 1.31
SNRNP200O75643 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNRNP200O75643 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNRNP200O75643 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SNRNP200O75643 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.23■■□□□ 1.31
SNRNP200O75643 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNRNP200O75643 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.23■■□□□ 1.31
SNRNP200O75643 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNRNP200O75643 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SNRNP200O75643 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SNRNP200O75643 AC096887.2-201ENST00000623443 1957 ntBASIC23.22■■□□□ 1.31
SNRNP200O75643 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SNRNP200O75643 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNRNP200O75643 ATP5G2P3-201ENST00000429083 425 ntBASIC23.21■■□□□ 1.31
SNRNP200O75643 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.21■■□□□ 1.31
SNRNP200O75643 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNRNP200O75643 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.21■■□□□ 1.31
SNRNP200O75643 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.2■■□□□ 1.31
SNRNP200O75643 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNRNP200O75643 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.2■■□□□ 1.3
SNRNP200O75643 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms