Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 UNC93B3-201ENST00000308076 687 ntBASIC11.12□□□□□ -0.63
USH2AO75445 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
USH2AO75445 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
USH2AO75445 AC097381.1-201ENST00000429019 1296 ntBASIC11.11□□□□□ -0.63
USH2AO75445 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC11.11□□□□□ -0.63
USH2AO75445 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
USH2AO75445 AC022616.5-201ENST00000518796 181 ntBASIC11.11□□□□□ -0.63
USH2AO75445 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
USH2AO75445 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC11.11□□□□□ -0.63
USH2AO75445 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
USH2AO75445 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
USH2AO75445 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
USH2AO75445 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC11.11□□□□□ -0.63
USH2AO75445 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
USH2AO75445 AC105265.2-201ENST00000467189 838 ntBASIC11.11□□□□□ -0.63
USH2AO75445 AC092028.1-203ENST00000608262 953 ntBASIC11.11□□□□□ -0.63
USH2AO75445 AC106739.1-201ENST00000617035 715 ntBASIC11.1□□□□□ -0.63
USH2AO75445 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
USH2AO75445 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
USH2AO75445 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
USH2AO75445 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
USH2AO75445 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
USH2AO75445 AC137630.3-201ENST00000607245 391 ntBASIC11.1□□□□□ -0.63
USH2AO75445 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
USH2AO75445 RASSF1-AS1-201ENST00000629828 790 ntBASIC11.1□□□□□ -0.63
USH2AO75445 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
USH2AO75445 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC11.1□□□□□ -0.63
USH2AO75445 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
USH2AO75445 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC11.1□□□□□ -0.63
USH2AO75445 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
USH2AO75445 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
USH2AO75445 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC11.09□□□□□ -0.63
USH2AO75445 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
USH2AO75445 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
USH2AO75445 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC11.09□□□□□ -0.63
USH2AO75445 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC11.09□□□□□ -0.63
USH2AO75445 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
USH2AO75445 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
USH2AO75445 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
USH2AO75445 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
USH2AO75445 RARRES2P11-201ENST00000635158 484 ntBASIC11.09□□□□□ -0.63
USH2AO75445 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
USH2AO75445 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC11.08□□□□□ -0.64
USH2AO75445 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC11.08□□□□□ -0.64
USH2AO75445 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC11.08□□□□□ -0.64
USH2AO75445 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
USH2AO75445 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
USH2AO75445 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
USH2AO75445 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
USH2AO75445 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC11.08□□□□□ -0.64
USH2AO75445 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
USH2AO75445 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC11.07□□□□□ -0.64
USH2AO75445 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
USH2AO75445 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
USH2AO75445 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
USH2AO75445 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
USH2AO75445 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
USH2AO75445 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
USH2AO75445 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
USH2AO75445 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
USH2AO75445 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
USH2AO75445 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC11.06□□□□□ -0.64
USH2AO75445 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
USH2AO75445 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.06□□□□□ -0.64
USH2AO75445 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
USH2AO75445 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
USH2AO75445 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC11.06□□□□□ -0.64
USH2AO75445 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC11.06□□□□□ -0.64
USH2AO75445 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC11.06□□□□□ -0.64
USH2AO75445 RPS2P7-201ENST00000447334 885 ntBASIC11.06□□□□□ -0.64
USH2AO75445 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC11.05□□□□□ -0.64
USH2AO75445 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC11.05□□□□□ -0.64
USH2AO75445 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC11.05□□□□□ -0.64
USH2AO75445 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
USH2AO75445 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
USH2AO75445 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
USH2AO75445 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC11.05□□□□□ -0.64
USH2AO75445 AC010997.5-201ENST00000609182 354 ntBASIC11.05□□□□□ -0.64
USH2AO75445 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC11.05□□□□□ -0.64
USH2AO75445 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
USH2AO75445 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
USH2AO75445 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
USH2AO75445 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
USH2AO75445 AL355001.2-201ENST00000620617 1191 ntBASIC11.05□□□□□ -0.64
USH2AO75445 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
USH2AO75445 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC11.04□□□□□ -0.64
USH2AO75445 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
USH2AO75445 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
USH2AO75445 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC11.04□□□□□ -0.64
USH2AO75445 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC11.04□□□□□ -0.64
USH2AO75445 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC11.04□□□□□ -0.64
USH2AO75445 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC11.04□□□□□ -0.64
USH2AO75445 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
USH2AO75445 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
USH2AO75445 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
USH2AO75445 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
USH2AO75445 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
USH2AO75445 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC11.04□□□□□ -0.64
USH2AO75445 AC024257.2-201ENST00000549699 147 ntBASIC11.04□□□□□ -0.64
USH2AO75445 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms