Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAF2O60831 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAF2O60831 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAF2O60831 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAF2O60831 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAF2O60831 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.39■□□□□ 0.85
PRAF2O60831 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PRAF2O60831 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAF2O60831 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAF2O60831 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAF2O60831 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PRAF2O60831 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAF2O60831 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.38■□□□□ 0.85
PRAF2O60831 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.38■□□□□ 0.85
PRAF2O60831 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAF2O60831 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.38■□□□□ 0.85
PRAF2O60831 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.38■□□□□ 0.85
PRAF2O60831 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.38■□□□□ 0.85
PRAF2O60831 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAF2O60831 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAF2O60831 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAF2O60831 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAF2O60831 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAF2O60831 AP003733.4-201ENST00000623785 1697 ntBASIC20.37■□□□□ 0.85
PRAF2O60831 AC096887.2-201ENST00000623443 1957 ntBASIC20.37■□□□□ 0.85
PRAF2O60831 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAF2O60831 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.37■□□□□ 0.85
PRAF2O60831 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAF2O60831 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAF2O60831 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAF2O60831 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAF2O60831 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAF2O60831 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAF2O60831 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAF2O60831 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.36■□□□□ 0.85
PRAF2O60831 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAF2O60831 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAF2O60831 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAF2O60831 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAF2O60831 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAF2O60831 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
PRAF2O60831 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PRAF2O60831 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAF2O60831 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAF2O60831 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.35■□□□□ 0.85
PRAF2O60831 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAF2O60831 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAF2O60831 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAF2O60831 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAF2O60831 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAF2O60831 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAF2O60831 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.34■□□□□ 0.85
PRAF2O60831 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAF2O60831 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAF2O60831 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAF2O60831 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
PRAF2O60831 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAF2O60831 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAF2O60831 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAF2O60831 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.32■□□□□ 0.84
PRAF2O60831 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAF2O60831 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAF2O60831 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PRAF2O60831 WHAMMP2-203ENST00000563942 1603 ntBASIC20.31■□□□□ 0.84
PRAF2O60831 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAF2O60831 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.3■□□□□ 0.84
PRAF2O60831 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAF2O60831 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAF2O60831 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAF2O60831 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.3■□□□□ 0.84
PRAF2O60831 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAF2O60831 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAF2O60831 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAF2O60831 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAF2O60831 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAF2O60831 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAF2O60831 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAF2O60831 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAF2O60831 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAF2O60831 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAF2O60831 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAF2O60831 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAF2O60831 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAF2O60831 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.28■□□□□ 0.84
PRAF2O60831 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAF2O60831 AC141586.4-201ENST00000624558 1573 ntBASIC20.28■□□□□ 0.84
PRAF2O60831 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAF2O60831 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRAF2O60831 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAF2O60831 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAF2O60831 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PRAF2O60831 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
PRAF2O60831 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAF2O60831 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAF2O60831 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAF2O60831 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAF2O60831 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRAF2O60831 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRAF2O60831 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAF2O60831 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms