Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC145676.1-201ENST00000514988 2004 ntBASIC22.44■■□□□ 1.18
HCN1O60741 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
HCN1O60741 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.43■■□□□ 1.18
HCN1O60741 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.43■■□□□ 1.18
HCN1O60741 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
HCN1O60741 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
HCN1O60741 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.43■■□□□ 1.18
HCN1O60741 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HCN1O60741 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
HCN1O60741 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
HCN1O60741 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HCN1O60741 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HCN1O60741 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HCN1O60741 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.41■■□□□ 1.18
HCN1O60741 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HCN1O60741 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.41■■□□□ 1.18
HCN1O60741 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HCN1O60741 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HCN1O60741 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HCN1O60741 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.41■■□□□ 1.18
HCN1O60741 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
HCN1O60741 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.4■■□□□ 1.18
HCN1O60741 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HCN1O60741 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HCN1O60741 AC025884.2-201ENST00000553429 711 ntBASIC22.4■■□□□ 1.18
HCN1O60741 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HCN1O60741 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HCN1O60741 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.4■■□□□ 1.18
HCN1O60741 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HCN1O60741 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
HCN1O60741 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.39■■□□□ 1.18
HCN1O60741 WHAMMP3-201ENST00000611636 1609 ntBASIC22.39■■□□□ 1.18
HCN1O60741 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCN1O60741 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HCN1O60741 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCN1O60741 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCN1O60741 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HCN1O60741 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.38■■□□□ 1.17
HCN1O60741 AC142472.1-201ENST00000612013 1741 ntBASIC22.38■■□□□ 1.17
HCN1O60741 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCN1O60741 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HCN1O60741 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.38■■□□□ 1.17
HCN1O60741 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HCN1O60741 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.37■■□□□ 1.17
HCN1O60741 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCN1O60741 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCN1O60741 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCN1O60741 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCN1O60741 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HCN1O60741 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCN1O60741 KRT18P60-201ENST00000312876 1297 ntBASIC22.36■■□□□ 1.17
HCN1O60741 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
HCN1O60741 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.35■■□□□ 1.17
HCN1O60741 AC092803.2-201ENST00000564287 1899 ntBASIC22.35■■□□□ 1.17
HCN1O60741 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.35■■□□□ 1.17
HCN1O60741 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
HCN1O60741 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HCN1O60741 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCN1O60741 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCN1O60741 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCN1O60741 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.34■■□□□ 1.17
HCN1O60741 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
HCN1O60741 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HCN1O60741 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HCN1O60741 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HCN1O60741 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
HCN1O60741 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.32■■□□□ 1.16
HCN1O60741 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HCN1O60741 RP9P-202ENST00000450133 1212 ntBASIC22.32■■□□□ 1.16
HCN1O60741 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.32■■□□□ 1.16
HCN1O60741 AC133552.2-201ENST00000619106 1032 ntBASIC22.32■■□□□ 1.16
HCN1O60741 DUSP8P4-201ENST00000399538 1761 ntBASIC22.32■■□□□ 1.16
HCN1O60741 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HCN1O60741 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCN1O60741 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
HCN1O60741 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HCN1O60741 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.31■■□□□ 1.16
HCN1O60741 AC009831.1-201ENST00000580420 1582 ntBASIC22.31■■□□□ 1.16
HCN1O60741 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCN1O60741 MIR3960-201ENST00000583311 91 ntBASIC22.31■■□□□ 1.16
HCN1O60741 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCN1O60741 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCN1O60741 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCN1O60741 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HCN1O60741 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.3■■□□□ 1.16
HCN1O60741 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCN1O60741 TSPY13P-201ENST00000338964 914 ntBASIC22.3■■□□□ 1.16
HCN1O60741 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.3■■□□□ 1.16
HCN1O60741 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCN1O60741 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.3■■□□□ 1.16
HCN1O60741 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HCN1O60741 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.3■■□□□ 1.16
HCN1O60741 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.3■■□□□ 1.16
HCN1O60741 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HCN1O60741 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HCN1O60741 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.3■■□□□ 1.16
HCN1O60741 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
HCN1O60741 AL033527.3-201ENST00000566366 1196 ntBASIC22.29■■□□□ 1.16
HCN1O60741 AC026202.3-201ENST00000600805 1127 ntBASIC22.29■■□□□ 1.16
HCN1O60741 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms