Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PAX4O43316 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAX4O43316 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAX4O43316 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.15■□□□□ 0.34
PAX4O43316 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PAX4O43316 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PAX4O43316 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PAX4O43316 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PAX4O43316 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAX4O43316 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PAX4O43316 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAX4O43316 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAX4O43316 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAX4O43316 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAX4O43316 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAX4O43316 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PAX4O43316 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PAX4O43316 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PAX4O43316 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAX4O43316 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAX4O43316 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAX4O43316 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PAX4O43316 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.13■□□□□ 0.33
PAX4O43316 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PAX4O43316 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PAX4O43316 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PAX4O43316 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.12■□□□□ 0.33
PAX4O43316 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PAX4O43316 MIR3960-201ENST00000583311 91 ntBASIC17.12■□□□□ 0.33
PAX4O43316 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.11■□□□□ 0.33
PAX4O43316 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PAX4O43316 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
PAX4O43316 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.11■□□□□ 0.33
PAX4O43316 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAX4O43316 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PAX4O43316 AC025884.2-201ENST00000553429 711 ntBASIC17.11■□□□□ 0.33
PAX4O43316 RNF126P1-201ENST00000567452 1320 ntBASIC17.11■□□□□ 0.33
PAX4O43316 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PAX4O43316 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PAX4O43316 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PAX4O43316 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.1■□□□□ 0.33
PAX4O43316 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PAX4O43316 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PAX4O43316 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.1■□□□□ 0.33
PAX4O43316 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAX4O43316 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PAX4O43316 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAX4O43316 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PAX4O43316 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.09■□□□□ 0.33
PAX4O43316 HSD17B1P1-201ENST00000590052 955 ntBASIC17.09■□□□□ 0.33
PAX4O43316 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAX4O43316 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PAX4O43316 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAX4O43316 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAX4O43316 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PAX4O43316 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.09■□□□□ 0.33
PAX4O43316 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PAX4O43316 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PAX4O43316 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PAX4O43316 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
PAX4O43316 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAX4O43316 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAX4O43316 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAX4O43316 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.08■□□□□ 0.32
PAX4O43316 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAX4O43316 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAX4O43316 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PAX4O43316 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.08■□□□□ 0.32
PAX4O43316 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAX4O43316 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PAX4O43316 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PAX4O43316 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PAX4O43316 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PAX4O43316 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.06■□□□□ 0.32
PAX4O43316 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PAX4O43316 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX4O43316 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX4O43316 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAX4O43316 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.06■□□□□ 0.32
PAX4O43316 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.06■□□□□ 0.32
PAX4O43316 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.06■□□□□ 0.32
PAX4O43316 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.06■□□□□ 0.32
PAX4O43316 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.06■□□□□ 0.32
PAX4O43316 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAX4O43316 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PAX4O43316 RP9P-202ENST00000450133 1212 ntBASIC17.05■□□□□ 0.32
PAX4O43316 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.05■□□□□ 0.32
PAX4O43316 AC007029.1-201ENST00000604183 313 ntBASIC17.05■□□□□ 0.32
PAX4O43316 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.05■□□□□ 0.32
PAX4O43316 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAX4O43316 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAX4O43316 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.05■□□□□ 0.32
PAX4O43316 AC135731.1-201ENST00000569415 2548 ntBASIC17.05■□□□□ 0.32
PAX4O43316 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PAX4O43316 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PAX4O43316 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.04■□□□□ 0.32
PAX4O43316 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
PAX4O43316 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX4O43316 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAX4O43316 AC092803.2-201ENST00000564287 1899 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms