Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC110285.7-201ENST00000624417 1536 ntBASIC16.42■□□□□ 0.22
NDUFA1O15239 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFA1O15239 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.42■□□□□ 0.22
NDUFA1O15239 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFA1O15239 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFA1O15239 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA1O15239 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NDUFA1O15239 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA1O15239 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NDUFA1O15239 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA1O15239 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA1O15239 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.4■□□□□ 0.22
NDUFA1O15239 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA1O15239 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NDUFA1O15239 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NDUFA1O15239 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NDUFA1O15239 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.4■□□□□ 0.22
NDUFA1O15239 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA1O15239 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NDUFA1O15239 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.39■□□□□ 0.22
NDUFA1O15239 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.22
NDUFA1O15239 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA1O15239 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA1O15239 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA1O15239 AC133561.1-201ENST00000568600 2415 ntBASIC16.39■□□□□ 0.21
NDUFA1O15239 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NDUFA1O15239 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA1O15239 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 WHAMMP3-201ENST00000611636 1609 ntBASIC16.38■□□□□ 0.21
NDUFA1O15239 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NDUFA1O15239 DUX4L29-201ENST00000425409 679 ntBASIC16.38■□□□□ 0.21
NDUFA1O15239 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.38■□□□□ 0.21
NDUFA1O15239 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA1O15239 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.37■□□□□ 0.21
NDUFA1O15239 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NDUFA1O15239 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.37■□□□□ 0.21
NDUFA1O15239 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.37■□□□□ 0.21
NDUFA1O15239 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA1O15239 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA1O15239 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDUFA1O15239 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA1O15239 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NDUFA1O15239 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.35■□□□□ 0.21
NDUFA1O15239 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFA1O15239 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFA1O15239 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA1O15239 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFA1O15239 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA1O15239 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
NDUFA1O15239 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NDUFA1O15239 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
NDUFA1O15239 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA1O15239 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA1O15239 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA1O15239 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.34■□□□□ 0.21
NDUFA1O15239 AC021231.2-201ENST00000594613 730 ntBASIC16.34■□□□□ 0.21
NDUFA1O15239 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NDUFA1O15239 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA1O15239 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.33■□□□□ 0.21
NDUFA1O15239 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.33■□□□□ 0.21
NDUFA1O15239 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.33■□□□□ 0.2
NDUFA1O15239 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NDUFA1O15239 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.33■□□□□ 0.2
NDUFA1O15239 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFA1O15239 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.33■□□□□ 0.2
NDUFA1O15239 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms