Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC28.84■■■□□ 2.21
SSC5DA1L4H1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SSC5DA1L4H1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
SSC5DA1L4H1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.83■■■□□ 2.21
SSC5DA1L4H1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SSC5DA1L4H1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SSC5DA1L4H1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
SSC5DA1L4H1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SSC5DA1L4H1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
SSC5DA1L4H1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SSC5DA1L4H1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.82■■■□□ 2.2
SSC5DA1L4H1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.82■■■□□ 2.2
SSC5DA1L4H1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
SSC5DA1L4H1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
SSC5DA1L4H1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SSC5DA1L4H1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.81■■■□□ 2.2
SSC5DA1L4H1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SSC5DA1L4H1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SSC5DA1L4H1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.8■■■□□ 2.2
SSC5DA1L4H1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SSC5DA1L4H1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SSC5DA1L4H1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.79■■■□□ 2.2
SSC5DA1L4H1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SSC5DA1L4H1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SSC5DA1L4H1 AC008406.3-201ENST00000620001 1374 ntBASIC28.79■■■□□ 2.2
SSC5DA1L4H1 MIR4787-201ENST00000607364 84 ntBASIC28.79■■■□□ 2.2
SSC5DA1L4H1 MIR935-201ENST00000401179 91 ntBASIC28.78■■■□□ 2.2
SSC5DA1L4H1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.78■■■□□ 2.2
SSC5DA1L4H1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
SSC5DA1L4H1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SSC5DA1L4H1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.77■■■□□ 2.2
SSC5DA1L4H1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.77■■■□□ 2.2
SSC5DA1L4H1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.76■■■□□ 2.2
SSC5DA1L4H1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.76■■■□□ 2.19
SSC5DA1L4H1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SSC5DA1L4H1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SSC5DA1L4H1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SSC5DA1L4H1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
SSC5DA1L4H1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
SSC5DA1L4H1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.75■■■□□ 2.19
SSC5DA1L4H1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC28.75■■■□□ 2.19
SSC5DA1L4H1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.75■■■□□ 2.19
SSC5DA1L4H1 BX664725.1-201ENST00000438252 379 ntBASIC28.75■■■□□ 2.19
SSC5DA1L4H1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.75■■■□□ 2.19
SSC5DA1L4H1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.75■■■□□ 2.19
SSC5DA1L4H1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
SSC5DA1L4H1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SSC5DA1L4H1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
SSC5DA1L4H1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SSC5DA1L4H1 ABCB10P1-201ENST00000614297 2181 ntBASIC28.73■■■□□ 2.19
SSC5DA1L4H1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SSC5DA1L4H1 KRT125P-201ENST00000546827 989 ntBASIC28.73■■■□□ 2.19
SSC5DA1L4H1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SSC5DA1L4H1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SSC5DA1L4H1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SSC5DA1L4H1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
SSC5DA1L4H1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.72■■■□□ 2.19
SSC5DA1L4H1 KRT16P3-201ENST00000439127 1283 ntBASIC28.72■■■□□ 2.19
SSC5DA1L4H1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SSC5DA1L4H1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.72■■■□□ 2.19
SSC5DA1L4H1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.72■■■□□ 2.19
SSC5DA1L4H1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.71■■■□□ 2.19
SSC5DA1L4H1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
SSC5DA1L4H1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.71■■■□□ 2.19
SSC5DA1L4H1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
SSC5DA1L4H1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SSC5DA1L4H1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SSC5DA1L4H1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.7■■■□□ 2.19
SSC5DA1L4H1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.7■■■□□ 2.18
SSC5DA1L4H1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
SSC5DA1L4H1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.69■■■□□ 2.18
SSC5DA1L4H1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
SSC5DA1L4H1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SSC5DA1L4H1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.68■■■□□ 2.18
SSC5DA1L4H1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SSC5DA1L4H1 AC022616.5-201ENST00000518796 181 ntBASIC28.68■■■□□ 2.18
SSC5DA1L4H1 AL449106.1-201ENST00000608517 1980 ntBASIC28.68■■■□□ 2.18
SSC5DA1L4H1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SSC5DA1L4H1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
SSC5DA1L4H1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SSC5DA1L4H1 MIR638-201ENST00000385237 100 ntBASIC28.67■■■□□ 2.18
SSC5DA1L4H1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.67■■■□□ 2.18
SSC5DA1L4H1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SSC5DA1L4H1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SSC5DA1L4H1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.66■■■□□ 2.18
SSC5DA1L4H1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SSC5DA1L4H1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.65■■■□□ 2.18
SSC5DA1L4H1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
SSC5DA1L4H1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SSC5DA1L4H1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
SSC5DA1L4H1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.64■■■□□ 2.18
SSC5DA1L4H1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.64■■■□□ 2.18
SSC5DA1L4H1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.64■■■□□ 2.18
SSC5DA1L4H1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SSC5DA1L4H1 KRT18P24-201ENST00000344739 1156 ntBASIC28.64■■■□□ 2.18
SSC5DA1L4H1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SSC5DA1L4H1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.64■■■□□ 2.18
SSC5DA1L4H1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.63■■■□□ 2.17
SSC5DA1L4H1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SSC5DA1L4H1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms