Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV22A0A0B4J277 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV22A0A0B4J277 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV22A0A0B4J277 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV22A0A0B4J277 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV22A0A0B4J277 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV22A0A0B4J277 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV22A0A0B4J277 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV22A0A0B4J277 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV22A0A0B4J277 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 AC018358.1-201ENST00000631079 1402 ntBASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV22A0A0B4J277 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 EBPL-203ENST00000378270 579 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV22A0A0B4J277 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV22A0A0B4J277 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 SLC25A24-204ENST00000569674 2357 ntBASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 WASH5P-204ENST00000632292 975 ntBASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV22A0A0B4J277 AL121603.2-201ENST00000557373 2117 ntBASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 MED17-221ENST00000639724 2317 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV22A0A0B4J277 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV22A0A0B4J277 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV22A0A0B4J277 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV22A0A0B4J277 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV22A0A0B4J277 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV22A0A0B4J277 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV22A0A0B4J277 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 RNF165-205ENST00000588679 2904 ntBASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 AP004609.3-201ENST00000610705 1884 ntBASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 AC127502.1-201ENST00000399971 1502 ntBASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV22A0A0B4J277 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV22A0A0B4J277 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms