Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
MSANTD3-TMEFF1A0A0A6YYJ0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.2■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 KRT125P-201ENST00000546827 989 ntBASIC24.2■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.19■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.19■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.19■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.19■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.18■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 MIR4787-201ENST00000607364 84 ntBASIC24.18■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.17■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.17■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 BX664725.1-201ENST00000438252 379 ntBASIC24.16■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.15■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.15■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
MSANTD3-TMEFF1A0A0A6YYJ0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.14■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.13■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.13■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.13■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.11■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 UNC93B8-201ENST00000511903 705 ntBASIC24.11■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 AC022616.5-201ENST00000518796 181 ntBASIC24.11■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.11■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.1■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 MIR935-201ENST00000401179 91 ntBASIC24.1■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 AL449106.1-201ENST00000608517 1980 ntBASIC24.1■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.09■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.09■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.09■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.09■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.09■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 KRT18P10-201ENST00000388836 1287 ntBASIC24.08■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 KRT16P3-201ENST00000439127 1283 ntBASIC24.08■■□□□ 1.45
MSANTD3-TMEFF1A0A0A6YYJ0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.07■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 KRT18P24-201ENST00000344739 1156 ntBASIC24.06■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.05■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.04■■□□□ 1.44
MSANTD3-TMEFF1A0A0A6YYJ0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms